Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0567 ATGGCAATTTGTTCATCATCGTTTGAATCTTCCAATAACGGAAAGACATGGATCATCCATGGAATTGTGGTAGGAGTAGCAGTTACAGCAGCTGTGGTTGCACGCGCTTACCTTAACCGATTCAACAAATTCCGGAGCCGGGTCATAGGGATCATACCCGCCCGATTCGCTTCATCTCGCTTCCCGGGAAAGCCTCTCGTTCAAATCCTTGGCAAGCCCATGATCCAGAGGACATGGGAAAGGGCAAAGTTGGCAGCTACATTGGATCATGTTGTTGTGGCAACTGATGATGAAAAGATTGCTGACTGTTGTCGACAATTCGGAGCTGATGTGATAATGACATCAGAATCTTGCCGAAATGGTACTGAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAGAAATATGATGTTGTTGTCAACATTCAGGGTGATGAGCCTCTAATTGAACCTGAAATTATAGACGGTGTTGTCAAAGCTTTGCAGGCAGATCCAGATGCAGTATTTAGCACTGCAGTCACATCTTTAAACCCTGAAGATGCTCATGACCCAAATAGAGTGAAATGTGTGGTAGACAATCGTGGTTATGCCATCTATTTTTCACGAGGATTAATCCCATTCAACAAGTCAGGGAAGATTAATCAACAGTTCCCTTATTTGCTTCATCTTGGGATTCAGTACTATGATGCAAACTTTCTAAAGATATATCCATATCTTCAGCCTACTCCATTACAACTTGAGGAGGATTTGGAGCAGCTTAAGGTCCTTGAAAATGGCTATAAGATGAAGGTAGTAAAAGTTGACCATGAGGCCCATGGTGTTGACACTCCTGAAGATGTTCAAAAGATAGAATCTCTTATACTTGAGAGGAACTTATCTTGA 882 0.4297 MAICSSSFESSNNGKTWIIHGIVVGVAVTAAVVARAYLNRFNKFRSRVIGIIPARFASSRFPGKPLVQILGKPMIQRTWERAKLAATLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQKLGKKYDVVVNIQGDEPLIEPEIIDGVVKALQADPDAVFSTAVTSLNPEDAHDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKINQQFPYLLHLGIQYYDANFLKIYPYLQPTPLQLEEDLEQLKVLENGYKMKVVKVDHEAHGVDTPEDVQKIESLILERNLS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0567 293 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 38 287 IPR029044 -
Lal1g0567 293 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 51 281 IPR004528 GO:0008690
Lal1g0567 293 PANTHER BNAA05G35640D PROTEIN 1 293 - -
Lal1g0567 293 Pfam Cytidylyltransferase 49 260 IPR003329 -
Lal1g0567 293 SUPERFAMILY Nucleotide-diphospho-sugar transferases 48 290 IPR029044 -
Lal1g0567 293 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 46 288 IPR004528 GO:0008690
Lal1g0567 293 CDD CMP-KDO-Synthetase 47 286 IPR004528 GO:0008690
Lal1g0567 293 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0567 Lal-Chr1 3651222 3655145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0567 K00979 - gmx:100800647 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0567 1 3651222 3655145 Lal1g0567 1 3651222 3655145 ECH