Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0565 ATGAGGGGTCCTTTAGGTGCAGTAATAGGAAGGTACCCATCAAGTGATGGAGTTACCCAAATGGGTGGAATCATAAGGCATAATAGGAAATGCAGAGACATTACTGTTCTTGTGATCTTTATTGTATTCTGGATAGCAATGATTGTAAACTCCAGCTTTGGTTTCAACCAAGGGAACCCACTAAGGCTTACTAATGGGCTGGACTACAAAGGGAATGTGTGTGGGGATAAGCATGCACACCCCGACCTCAGTGAATTGGAGCTCCGATATTGGCAAAATCCTAATCAGGTTTATCAGAGCGGATTGAAGAATAGCCAATTTAAACTGGCCAATGCCCGCAGTATATGTTTGTTGGACTGCCCTATACCTTCTGAAGATTCTCTTGACTGGGTGTGTGATTATCCTGAAGGAGATATTCGTCTTTCAATGACTGATTGGATTAATAGGAACTACGATTATTTTGAGTTCCTGACGCCAGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCATGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAATTTATTGCCCGAGCATCGAACACGTCTTTGAAGCATTGGCAGCAGATGGGTGGAGTTAACATAAATGAAGACATTGTTATTGACAAGTCCATTCACAAATCTATTAATTCTCATTCAGCTGTCTTAAAGAGGTACATGGCTGACATAGGAAAGGCATGGCCTGTGCTCATCGTTTGTGGAGGGATTTTACCTCTTTTTCTATCTGTGGTTTGGTTGGTGATGATTCGGCATTTTGTTGCTGCAATGCCTTGGATAACAGTGGTGTTCTTTAATGTCCTAATAGTATCAGCCACAATTTTCTACTATCTAAAAGCTGGATGGATCGGAAATGATGCCATTTCTCCCATCATTGGAGAACATGACCCTTACATTAATGTATTTGGGAGGGAACTGACTCATCTACGTGTGGCCACTGTAGTTATGACCTTTATCATGGCTGTTGCCATTCTTACATCAATTGCTATTGTTCGACGCATCCTTATGGCAACATCTGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGCGCTCATTATTTTTCCACTCATACCATATGGCATCCTCGCCGTGTTTTACATGTTCTGGATTTCCGCTGCTCTCCACTTGTTCAGCTCTGGACAGATTGTTCAGAATCACTGCAACTCTAACTGCTGCACATATGATCTCCTGGCAAAACGGGTGAACTGTGACCTGTGCTGTGGATACAGCATTCACTACACCCCACATATTGGACTTGCCATCCTTTTTCACCTATTTGGGTGCTATTGGGCTACACAATTTTTCATGGCATGCTCCTCAACAGTGTTTGCCGGGTCTGTTGCTTCTTATTATTGGGCCTGTGGTGAAACATCTCATGAAATTCCATTTCTTTCAGTTTTTTCCTCCATGAAGAGGCTCATGCGTTACAGTCTTGGGTCCATGGCTCTTGGCTCTCTGATTGTATCATTTGTGGAATCAATCCGCTTTCTGCTTGAATCTATCCGTCGCAAACTAAAAGTCTCTAGTTACGAGCCTGACAACTGCTTAGGAAGGGCTGCATACCAATCTGCTCAATGTTTTCTCAGGTGTATTGAGTGGATCATCAAATCAGTAAACCGAAATGCTTACATCATGATTGCTATAACGGGTAAAAGTTTCTTTGTGTCTTCTTCAACTGCAACAGAACTGATCATGAATAACATCCTGAAGATTGGGCGTCTGAATGTAATTGGAGATGTCATTTTGTTCCTCGGAAAACTATGTGTCAGCCTCTCAAGTGTTGTGTTTGCATTCCTTATGTTGGACACACACAAGTTCAAATCTTCCCATTACAAGATCTCATCTCCACTTTTTCCTGTTCTGGTTTGCTGGGGTCTTGGATATATTGTTGCAACCCTTTTCTTCGCAGTTGTGGAGATGTCAATTGACACCATTGTTCTCTCATATTGCCAGGATTCTGAAGAGCACCAGGGGACAGCACAGTATGCTCCACCCCTTCTCATTGAAACTCTCAGTGACCAAAATGAGACACAAAGACTTACACAAGGAACCCAATGA 2094 0.4245 MRGPLGAVIGRYPSSDGVTQMGGIIRHNRKCRDITVLVIFIVFWIAMIVNSSFGFNQGNPLRLTNGLDYKGNVCGDKHAHPDLSELELRYWQNPNQVYQSGLKNSQFKLANARSICLLDCPIPSEDSLDWVCDYPEGDIRLSMTDWINRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNTSLKHWQQMGGVNINEDIVIDKSIHKSINSHSAVLKRYMADIGKAWPVLIVCGGILPLFLSVVWLVMIRHFVAAMPWITVVFFNVLIVSATIFYYLKAGWIGNDAISPIIGEHDPYINVFGRELTHLRVATVVMTFIMAVAILTSIAIVRRILMATSVAAKVIGEVQALIIFPLIPYGILAVFYMFWISAALHLFSSGQIVQNHCNSNCCTYDLLAKRVNCDLCCGYSIHYTPHIGLAILFHLFGCYWATQFFMACSSTVFAGSVASYYWACGETSHEIPFLSVFSSMKRLMRYSLGSMALGSLIVSFVESIRFLLESIRRKLKVSSYEPDNCLGRAAYQSAQCFLRCIEWIIKSVNRNAYIMIAITGKSFFVSSSTATELIMNNILKIGRLNVIGDVILFLGKLCVSLSSVVFAFLMLDTHKFKSSHYKISSPLFPVLVCWGLGYIVATLFFAVVEMSIDTIVLSYCQDSEEHQGTAQYAPPLLIETLSDQNETQRLTQGTQ 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0565 697 Pfam Plasma-membrane choline transporter 326 666 IPR007603 GO:0022857|GO:0055085
Lal1g0565 697 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 694 - -
Lal1g0565 697 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 694 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0565 Lal-Chr1 3637544 3643435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0565 K15377 - gmx:100803501 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0565 1 3637544 3643435 Lal1g0565 1 3637544 3643435 ECH