Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0549 ATGCCTGAAGCTCCCAGAGACTACAACCTCTTAGAGCAGAACAAGAAAACTCTTGACTTCATTGAGGATGTCACCTCAAACGCTGATCAAGTCCAAAAGAAGGTCCTACGAGAAATCCTGTCTCTTAATGCAAACGTTGAGTACCTTCAACGACATGGTCTTAACGGCCAAACAGACACTCACACTTTCAAGAAACTCGTGCCTGTTGTTTCATACGAGGATGTTCAACCTGACATCAACCGCATCGCCAATGGTGACACTTCTCCAATCCTTTGCTCCAAACCCATTTCTGAGTTCCTCACTAGCTCTGGGACATCTGGGGGAGAGAGAAAGTTGATGCCAACAATTGAAGAGGAACTTGGGAGGAGGAGCTTGCTGTATAGTTTGTTGAACCCAGTGATGAGTCAGTTTGTGCCTGGGTTAGAAAAAGGAAAAGGAATGTACCTAATGTTCATAAAATCTGAGGCCAAAACACCTGGAGGGGTAGTGGCAAGGCCAGTTCTGACCAGCTATTACAAAAGTTCCTATTTTAGAGACAGACCTTATGACCCTTACACAAACTACACAAGCCCAAATGAGACAGTTCTCTGTCCTGATTCCTACCAAAGCATGTATTCCCAATTGCTTTGTGGTCTTTGCCAAAACAAAGAGGTTATGAGGGTAGGGGCTGTGTTTGCCTCCGGCTTCATAAGAGCAATTAGGTTCCTTGAGAAGCACTGGGCCCTTCTTTCCAATGATATTAGGACAGGAACCATCAATTCCTTAATCACTGACACCTCAGTCAGAGAGTCTGTCATGAAGATCCTCAAACCTGACCCAAAGCTTGCTGATTTTATCCAAACTGAGTGTAGCAATAGTTCTTGGCAGGGGATTATTACAAGGTTGTGGCCCAACACTAAGTATGTGGATGTTATTGTGACTGGGACAATGTCACAGTACATCCCCATATTAGATTACTATAGCAATGGTCTCCCACTTGTTTGCACCATGTATGCTTCTAGTGAATGCTACTTCGGTGTCAACCTCAACCCTCTTTGCAAACCCAGTGATGTGTCTTATACCCTAATCCCTACTATGTGCTACTTTGAGTTCTTACCTGTTAACAGAACCAATGGGGTTACTGATCATTCTCTTCAAACACCCAGATCTCTTGATGAGAAAGAACAAAAGGAGTTGGTTGACCTTGTTGATGTCAAACTTGGCCAAGAATATGAGCTTGTTGTCACAACTTATGCTGGACTATACCGTTACAGAGTGGGTGATGTGTTGAAAGTGGCTGGTTTCAAGAACAAGACCCCTCAATTCAACTTCATATGCAGGAAAAATGTTGTGTTGAGCATTGATTCAGACAAGACTGATGAGGTTGAGCTTCAGAATGCAATGAAGAATGCTGTGACACACTTGGTACCATTTGATGCTTCTGTGTCTGAGTACACTAGCCATGCAGACACCAACACAATCCCAGGCCACTATGTGCTGTATTGGGAACTCACTTTCAATGGTTCAACACCAATCCCTCCTTGTGTGTATGAGGATTGTTGCTTAACTATTGAGGAGTCACTCAACAGTGTATACCGCCAAGGCCGGGTCTCTGATAAATCAATTGGGCCCCTTGAGATCAAGATTGTGGAGCATGGCACCTTTGACAAGCTCATGGACTATGCCATTAGCTTAGGTGCATCAATAAATCAATACAAGACACCAAGGTGTGTGAAATTTGCACCAGTTGTGGAGTTATTGAACTCAAAGGTTACATCAACCTATTCTAGTCCTAAGTGTCCAAAGTGGGTTCCAGGCCACAAGCAGTGGGTCAATCAAAATTAA 1824 0.4375 MPEAPRDYNLLEQNKKTLDFIEDVTSNADQVQKKVLREILSLNANVEYLQRHGLNGQTDTHTFKKLVPVVSYEDVQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLNPVMSQFVPGLEKGKGMYLMFIKSEAKTPGGVVARPVLTSYYKSSYFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVMRVGAVFASGFIRAIRFLEKHWALLSNDIRTGTINSLITDTSVRESVMKILKPDPKLADFIQTECSNSSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSDVSYTLIPTMCYFEFLPVNRTNGVTDHSLQTPRSLDEKEQKELVDLVDVKLGQEYELVVTTYAGLYRYRVGDVLKVAGFKNKTPQFNFICRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDASVSEYTSHADTNTIPGHYVLYWELTFNGSTPIPPCVYEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEHGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSKVTSTYSSPKCPKWVPGHKQWVNQN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0549 607 Pfam GH3 auxin-responsive promoter 21 572 IPR004993 -
Lal1g0549 607 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 604 IPR004993 -
Lal1g0549 607 PANTHER BNAC03G14570D PROTEIN 7 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0549 Lal-Chr1 3538929 3541562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0549 9 590 EF-hand Containing Proteins AT1G23160 49.239 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0549 K14487 - gmx:100791987 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0549 1 3538929 3541562 Lal1g0549 1 3538929 3541562 ECH
Lal1g0549 1 3538929 3541562 Lal2g0434 2 2593620 2597090 LSH