Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0546 ATGAAACGAGGAAACCAGGAATTCCCTTCAACCTCCTTTGGTCCACCTCGATCCAAACCTAGACATAATCCTCAAGGTGATGGACAATTTCTGGAGGATGAAAGCACAAAGATTTTTGCTCGGAAGGTTGCTGATCATTACAGTGCAAGATCCAACCAGACTCTAGAAGAACGGGAAGCTAGTCCAATTATTCATTTAAAGAAACTCAACAATTGGATTAAGAGCGTTTTAATTCAGCTTTACACCTGTCGAGGGGATGCAGTCCTTGACCTGGCCTGTGGCAAGGGTGGTGATCTTATCAAATGGGACAAGGCCAAAATTGGATATTATGTTGGTATCGATATTGCTGAAGGCTCAATCAAAGACTGTCATACACGTTACAATGGTGATGCTGACCATCACCAGCGTCGCAAGAAGTTTACGTTTCCTGCTCGCCTAATATGTGGAGATTGTTATGAGGTTCGCTTGGACAAAGTTCTTGCAGATGATGCTCCTTTTGATATTTGTAGTTGCCAGTTTGCATTGCATTACTCCTGGTCTACTGAGGCTCGTGCTCGGCAAGCATTGGCTAATGTGTCAGCTTTACTTCGTCCCGGAGGTGTTTTCATTGGGACTATGCCAGATGCCAATGTGATTATCAAAAAACTTAGAGAAGAAAAGATGGTGAAGTTCTGTCTTAGGTGGTTTGGGGCTTGGGAATGTGTGGAGGAGACTATTAGAAGCCTTAGTAAGGAGAGTAGGTCAAATGTAGCTGAAGGATTGACTTTTGGTAACAGTGTCTATTGGGTGCGTTTTGATGAAGAATTTTCTAGTAAGGATGCTGTTGATTGTCCAGAATGGGTTGTCCCCTTCCACATATTCAAGTCATTAGCTGAAGAGTATGATTTTGAGCTTGTCTTCGCAAAGAACTCACATGAATTTGTGCACGAGTATATGAAAAAACCAGAATTTGTGGAGCTAATGCGAAGACTTGGTGCATTGGGGGATAGCAATCAAGATCAGAGTACACTCTCACCGGAGGAATGGGAAGTAGCATATTTGTACATGACATTTGTGTTGAGAAAGCGAGGTCAACCCGATAAAACAAAAGCAGTTGGCAGAAGAGACAGAGGGTCAATGCATATTTCAGAAGATGACATATTGTATGTTAGCAATGAATGA 1161 0.4246 MKRGNQEFPSTSFGPPRSKPRHNPQGDGQFLEDESTKIFARKVADHYSARSNQTLEEREASPIIHLKKLNNWIKSVLIQLYTCRGDAVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIKDCHTRYNGDADHHQRRKKFTFPARLICGDCYEVRLDKVLADDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGVFIGTMPDANVIIKKLREEKMVKFCLRWFGAWECVEETIRSLSKESRSNVAEGLTFGNSVYWVRFDEEFSSKDAVDCPEWVVPFHIFKSLAEEYDFELVFAKNSHEFVHEYMKKPEFVELMRRLGALGDSNQDQSTLSPEEWEVAYLYMTFVLRKRGQPDKTKAVGRRDRGSMHISEDDILYVSNE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0546 386 CDD AdoMet_MTases 88 203 - -
Lal1g0546 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 355 IPR029063 -
Lal1g0546 386 MobiDBLite consensus disorder prediction 1 31 - -
Lal1g0546 386 Pfam mRNA capping enzyme 33 218 IPR004971 -
Lal1g0546 386 Pfam mRNA capping enzyme 243 356 IPR004971 -
Lal1g0546 386 ProSiteProfiles mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile. 22 362 IPR004971 -
Lal1g0546 386 PANTHER MRNA CAP GUANINE-N7 METHYLTRANSFERASE 250 383 - -
Lal1g0546 386 PANTHER MRNA CAP GUANINE-N7 METHYLTRANSFERASE 1 227 - -
Lal1g0546 386 MobiDBLite consensus disorder prediction 1 18 - -
Lal1g0546 386 PIRSF ABD1 6 231 IPR016899 GO:0004482|GO:0006370
Lal1g0546 386 PIRSF ABD1 233 358 IPR016899 GO:0004482|GO:0006370
Lal1g0546 386 Gene3D Vaccinia Virus protein VP39 59 357 IPR029063 -
Lal1g0546 386 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 250 383 IPR039753 GO:0004482
Lal1g0546 386 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 1 227 IPR039753 GO:0004482
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0546 Lal-Chr1 3511850 3517021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0546 K00565 - gmx:100779811 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0546 1 3511850 3517021 Lal2g0542 2 3259425 3267778 LSH