Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0532 ATGATTTCTTCAAGCAAACTCAAATCCGTCGATTTTTACAGAAAAATCCCAAGAGATTTGACTGAGGCGTCATTATCAGGAGCTGGATTATCCATAGTGGCTGCTCTCTCCATGATGTTTTTATTTGGAATGGAACTAAGTAATTATTTGTCTGTCAGCACCTCGACATCTGTGATTGTTGACAAAAGTTCTGATGGAGATTTTTTACGTATAGATTTCAATATCAGTTTTCCATCGCTTTCATGTGAGTTTGCATCAGTTGATGTGAGTGATGTGCTGGGAACAAACAGGCTCAATATAACGAAAACAGTTCGTAAGTTTTCCATCGATTCAAATTTAAGACCCACTGGTACTGAGTTTCATTCAGGAACAGTTGCAAATGCTGTTAAGCATGATGATGAAGTAGATGGAGAGTCTGTTGAAGGTTCTTTATCTCTCACTGCGCAGAACTTTGATAAATATATTCACCAGTTTCCAATTACAGTTGTTAACTTTTATGCACCTTGGTGTTCCTGGTGTCAACGTTTGAAACCTTCTTGGGAGAAGGCAGATAAAGTAATAAAAGAGAGACATGACCCAGAAATAGATGGGCGTATTCTTGTGGCGAAGGTAGATTGCACTCAGGAAGGTGATTTATGCAGGAGGCATCACATACAAGGGTATCCTTCTATTCGCATCTTCCGCAAAGGAAGTGATGTCAGAAGTGAACATGGGCATGAACATGAGTCTTATTATGGAGACCGTGATACAGAGAGCCTAGTCAAGATGATGGAGAATTTGGTCACATCTCTCCCAACAGAATCTCAGAAGCCAGCTTTGGAGGATAAATCCACTGCAGCAAATAATACCAAGAGACCAGCACCATCAACAGGTGGATGTAGAGTTGAAGGATATGTACGTGTGAAAAAGGTTCCTGGAAACCTGATCATCTCAGCTAGATCGGATGCCCATTCCTTTGATGCTTCTCAAATGAATATGTCACATGTCATAAACCATCTGTCTTTTGGAAGGAAGATAACAGCTAGGACGATGAGTGATGTGAAGATCTTGATACCTCACATAGGTAGCAGCAGTGACAGACTGAAAGGCCGGTCATTCATCAATACTCGTGATTTAGAAGGAAATATTACTATAGAGCATTATATTCAGATAGTTAAAACAGAGGTTACAACTAGAACAGGTCATAGATTAGTTGAGGAGTACGAGTACACAGCGCACAGCAATGTGGCACACAGTGTTGACATTCCGGTAGCAAAATTTGATCTCGAGTTCTCCCCCATGCAGGTCTCAATAACAGAAAACCAGAAGTCTTTTTCACATTTTATCACAAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTTTGGACTCGGTTCTGCACAACACTATTAGTATTTTAAAAAAGAAGGTTGAGCTTGGCAAAAATTTCTGA 1443 0.4019 MISSSKLKSVDFYRKIPRDLTEASLSGAGLSIVAALSMMFLFGMELSNYLSVSTSTSVIVDKSSDGDFLRIDFNISFPSLSCEFASVDVSDVLGTNRLNITKTVRKFSIDSNLRPTGTEFHSGTVANAVKHDDEVDGESVEGSLSLTAQNFDKYIHQFPITVVNFYAPWCSWCQRLKPSWEKADKVIKERHDPEIDGRILVAKVDCTQEGDLCRRHHIQGYPSIRIFRKGSDVRSEHGHEHESYYGDRDTESLVKMMENLVTSLPTESQKPALEDKSTAANNTKRPAPSTGGCRVEGYVRVKKVPGNLIISARSDAHSFDASQMNMSHVINHLSFGRKITARTMSDVKILIPHIGSSSDRLKGRSFINTRDLEGNITIEHYIQIVKTEVTTRTGHRLVEEYEYTAHSNVAHSVDIPVAKFDLEFSPMQVSITENQKSFSHFITNVCAIIGGVFTVAGILDSVLHNTISILKKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0532 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Lal1g0532 480 SUPERFAMILY Thioredoxin-like 144 260 IPR036249 -
Lal1g0532 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Lal1g0532 480 ProSiteProfiles Thioredoxin domain profile. 120 262 IPR013766 -
Lal1g0532 480 Gene3D Glutaredoxin 136 288 - -
Lal1g0532 480 MobiDBLite consensus disorder prediction 264 288 - -
Lal1g0532 480 MobiDBLite consensus disorder prediction 264 293 - -
Lal1g0532 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Lal1g0532 480 CDD PDI_a_family 144 257 - -
Lal1g0532 480 Pfam Endoplasmic reticulum vesicle transporter 287 460 IPR012936 -
Lal1g0532 480 Pfam Thioredoxin 144 255 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0532 Lal-Chr1 3423056 3432155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0532 - - aprc:113860202 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0532 1 3423056 3432155 Lal1g0532 1 3423056 3432155 ECH
Lal1g0532 1 3423056 3432155 Lal9g0463 9 3052764 3061956 LSH