Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0531 ATGGATCCAGCAACATTTCCTTTACACATAGCAATGTATCCATGGTTTGCTATGGGTCACTTAACCCCATTTCTTCACCTTGCTAATAAATTAGCCAAAAGAGGACACAAAATCTCTTTCATTATCCCTACAAAAACACAACCCAAATTACACCACCTTAACCTTCATCCTTCTCTTATCACCTTTGTACCTGTCACTGTTCCTCATGTTTATGGTCTTCCTAATGATGCAGAAACCACTTCTGATGTTCCTTCTTCTTTGTTCCCTCTTCTTGCCACTGCTATGGATCTTACCAAAAATGACATAAAACTCATCCTTCTTCAGTTAAAACCACATATAGTTTTCTTTGATTTCTCCACATATTGGATACCAAGTTTGACAAGTAAATATGGGATTAAGTCTTTTCAGTACTGGATCATTAGTCCAGCTACTATAGCTTACATGGCATCACCATTAAGAGAAAGAGAAGTTGATATGAAAAAACCACCTTCTGGTTTTCCTGATTCTTTCATCAAGCTTCATCCACATGAAGTTAGGTTCTTTGATGCAGCAAGGAGATTGGAATTTGGCAATGGTGTTCTTTTATATGACCGTATATCAACCGGTGCTAGGTTATCAGATGCTATTGGATTCAAAGGTTGTAAAGAAATTGAAGGGTCTTATGTGGATTATCTTGAAACACAACTAGGTAAAACAGTTCTACTTTCAGGACCTCTTATACCAGAACCATGTGCTTCTACTTTGGATGAAAAATGGGCTAAATGGCTTGATAAATTCAAGCGTGGTTCAGTAATATACTGTGCATTTGGAAGTGAAAACACTTTACAGAAAAATCAGTTTGAAGAATTGTTACTGGGTCTTGAGTTAACAAGAACACCATTTCTTGCAGCACTTAAACCACCTAAGGAATTTGACTCCATTGAGGAAGCATTGCCAAAAGGGTTTAAGGAAAGGGTTAAAGAAAGAGGTATTGTATATGGTGGGTGGGTGCAGCAACAATTGATCTTAGCACACCCTTCTGTTGGGTGCTTTATAACACATTGTGGTGGAGCTTCTCTGACCGAGGCACTTGTGAGTCAGTGTCAGTTAGTGTTGTTGCCACGTTTAGGTTCTGATTTTATCATTAATGCAAGAAACATGGCTGGGAAATTGAAGGTTGGGGTTGAAGTGGAGAAAGGTGAAGAAGATGGTTTGTTCACAAAGGAAAGTGTATGTGAAGCTGTGAGAATTGTGATGGATGATGAGAGTGAGATTGGTAAAGAAGTTAGAGCTAATCATACCAAAGACGGACTTGAGAACGTGGTTGGAGACAACATATTCTTATCGTATTTTGGTGCCAGAATTCTGATTAATAAAGGCTGGTTAGTTGCATTGGGAATTTCATTTGTGATTGAAGCATTAAACCATGAGTTAATAAGCAACATTGCAAAGCAAAGTCTTTTTTTTGGAAGCATATAG 1458 0.3807 MDPATFPLHIAMYPWFAMGHLTPFLHLANKLAKRGHKISFIIPTKTQPKLHHLNLHPSLITFVPVTVPHVYGLPNDAETTSDVPSSLFPLLATAMDLTKNDIKLILLQLKPHIVFFDFSTYWIPSLTSKYGIKSFQYWIISPATIAYMASPLREREVDMKKPPSGFPDSFIKLHPHEVRFFDAARRLEFGNGVLLYDRISTGARLSDAIGFKGCKEIEGSYVDYLETQLGKTVLLSGPLIPEPCASTLDEKWAKWLDKFKRGSVIYCAFGSENTLQKNQFEELLLGLELTRTPFLAALKPPKEFDSIEEALPKGFKERVKERGIVYGGWVQQQLILAHPSVGCFITHCGGASLTEALVSQCQLVLLPRLGSDFIINARNMAGKLKVGVEVEKGEEDGLFTKESVCEAVRIVMDDESEIGKEVRANHTKDGLENVVGDNIFLSYFGARILINKGWLVALGISFVIEALNHELISNIAKQSLFFGSI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0531 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 427 - -
Lal1g0531 485 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 328 416 IPR002213 GO:0008194
Lal1g0531 485 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 5 428 - -
Lal1g0531 485 PANTHER GLYCOSYLTRANSFERASE 5 428 - -
Lal1g0531 485 Gene3D Glycogen Phosphorylase B; 7 252 - -
Lal1g0531 485 CDD GT1_Gtf-like 8 416 IPR002213 GO:0008194
Lal1g0531 485 Gene3D Glycogen Phosphorylase B; 253 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0531 Lal-Chr1 3419666 3421344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0531 8 428 Glycosyltransferase AT5G54010 50.474 3.08e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0531 K22794 K12933 gmx:100820538 684.485