Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0530 ATGAGGAGAAGGGAGTGCCATTCATTGTTGAAGGGAGGGATAGATGAGAAGAAATACAAACATGGGTTTTCTGGTGCTGAGATGAAATCACTAACAAGCATATGTGAGATTGTGTTACCACCTTTGTCAATGAATTCTTTAAAAGTAAAAAAGGAACATGAATCTGATTATGAGAATAACAAGTATGTGGAGTCTTTCTTGAACACTTCTGGTTCTTCCTATCCAATCCCTCATGAGGTGGCAGAAATGTTAACAAAAAGGGGCTTAACAGAAGCAGTAATACTGATTAGAGTGGTTTTATGGCTTCTGGCAACAAGGTTAGGAACCTTGTTGCTTTGTGGCTTTCTGTGTCTTAGTGACAAATGGCCCTATATCAACAACTTCTCAAGCATATCTTTGGACAAAAGAGAAAAGGTTATGCAGAAATGGCTGAAGCATAGGTTCCTCACACCTATTAGAGTTGCATTTGCTTACATCAAAATCTTGTGTCTCTTTTTTTTCTTCTCATGGCCAATTTTAATCAAAATAAAGAACACTTTAACCAAAATTGTTGATTTTGTTCAGGTTGATGAAAATGGGGTCAACCCAGCATGGAATGCCATTGGATATGTGGTGTCCACCAATGAGAATTTGAGAAATAATGGCTCCAACAAGAGGCCCCTTGAAAAGGGGGTTATAGAAACCATGCATGAATCTGACTCAACTCTTCAACAGTCTCTAGTTAACAAGGGCCTCAATGTAACACTGGACTCCAAAAACAACATCCTCAAAGTCAAATGTGATGCACTAGTCATAGGGTCTGGCAGTGGTGGAGGTGTTGCAGCTTCTGTTCTTTCAATTGCTGGCTACAAAGTGGTTGTTGTTGAGAAAGGAAACTATTTTGTTCCTCAAGATTATTCCTCTCTAGAAGGGCCTTCAATGAATCAATTATATGAAAATGGAGGGATCTTGGCTTCTGTGGACTCAAGAATTCTACTTTTAGCAGGATCAACTGTGGGTGGTGGCTCAGCAATTAATTGGTCAGCATGTATTAAAACACCACAAAATGTTATGAAAGATTGGTCTGAGGAACACAAGCTTCCACTCTTTCAAAGCCTAGAGTACCTCTCAGCAATGGAAACTGTGTGTGAAAAGATTGGTGTCACAGAAAATTGCACACATGAGGGGTTCCAGAATCAAGTACTAAGAAAAGGGTGTCAGAATCTTGGACTCAAAGTTGATTACGTGCCAAGGAACTCATCAGGGAATCATTACTGTGGCTCATGTGGTTATGGTTGTCCAACAGGTGAGAAACAAGGGACTCAAGTTACATGGCTTGTTGATGCTGTTGATAATGGTGCAGTTATAATAACAGGATGCAAAGCTGAGAGACTCTTGTTTGAAAGTAACAAGAATGTGAGTAGTGCTAAAAAGAAAAAATGCTTGGGAGTGATGGCTAAAACTTTAAGCAGCATAGTCACAATGAAGTTGCAAATTGAGGCCAAAGTAACAGTTTCTGCAGGTGGGGCACTTCTAACACCACCTTTGATGATCTCAAGTGGTTTAAGGAATAGGAACATTGGTAGGAACCTTCATCTGCATCCTGTACTATTGACATGGGGTTACTTTCCAAATTCAAATTCAGACCTAAAAGGTAAAGTCTTTGAGGGAGGTATAATCACATCAGTTCATAAAGTGCAATCATCTAGCTACACCAAATCAGAAGCAAAAGCTATAATTGAAACTCCTTTATTAGGGCCAGCTTCTTTTGCTTCACTATGCCCTTGGGAGTCTGGACTTGACATTAAAAAAAGAATGCTGAATTATTCAAGAACTTCTCATTTAATCACAATAATAAGAGACATGGGTTGTGGAGAAGTAACAAGAGAGGGAAGGATAAGCTACAAACTGAGTAAAGTTGACAGAGAAAACATGAAGTGTGGAGTGCAACAAGCACTGAGGATTCTAATAGCTGCAGGAGCAGTTGAAGTAGGGACACATAGAAGTGATGGGGAGAGAATAAAGTGTAATGAGATTAGTGAAAATGAAGTGGAAAAGTTTATAGAGAATGTGAATCCAGTGGAGGGTGCACTGTCACAAGGTGAGAATTGGAATATATATTCTTCTGCACATCAAATGGGTAGTTGCAGAATGGGAGTGAATGAAAAAGAAGGTGCAGTTGATGAAAATGGTGAGAGTTGGGAAGCACAAGGTTTGTTTGTTTGTGATGCAAGTTTGCTTCCTTCTGCTGTTGGTGTTAATCCTATGATCACAATCCAGTCAATTGCTTTTTGTATCTCAAATAGAATAGTTCATCATCTTAGGACTTTGTAA 2313 0.3926 MRRRECHSLLKGGIDEKKYKHGFSGAEMKSLTSICEIVLPPLSMNSLKVKKEHESDYENNKYVESFLNTSGSSYPIPHEVAEMLTKRGLTEAVILIRVVLWLLATRLGTLLLCGFLCLSDKWPYINNFSSISLDKREKVMQKWLKHRFLTPIRVAFAYIKILCLFFFFSWPILIKIKNTLTKIVDFVQVDENGVNPAWNAIGYVVSTNENLRNNGSNKRPLEKGVIETMHESDSTLQQSLVNKGLNVTLDSKNNILKVKCDALVIGSGSGGGVAASVLSIAGYKVVVVEKGNYFVPQDYSSLEGPSMNQLYENGGILASVDSRILLLAGSTVGGGSAINWSACIKTPQNVMKDWSEEHKLPLFQSLEYLSAMETVCEKIGVTENCTHEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPTGEKQGTQVTWLVDAVDNGAVIITGCKAERLLFESNKNVSSAKKKKCLGVMAKTLSSIVTMKLQIEAKVTVSAGGALLTPPLMISSGLRNRNIGRNLHLHPVLLTWGYFPNSNSDLKGKVFEGGIITSVHKVQSSSYTKSEAKAIIETPLLGPASFASLCPWESGLDIKKRMLNYSRTSHLITIIRDMGCGEVTREGRISYKLSKVDRENMKCGVQQALRILIAAGAVEVGTHRSDGERIKCNEISENEVEKFIENVNPVEGALSQGENWNIYSSAHQMGSCRMGVNEKEGAVDENGESWEAQGLFVCDASLLPSAVGVNPMITIQSIAFCISNRIVHHLRTL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0530 770 Pfam GMC oxidoreductase 261 529 IPR000172 GO:0016614|GO:0050660
Lal1g0530 770 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 3 768 - -
Lal1g0530 770 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 3 768 - -
Lal1g0530 770 Gene3D - 599 766 IPR036188 -
Lal1g0530 770 SUPERFAMILY FAD/NAD(P)-binding domain 257 766 IPR036188 -
Lal1g0530 770 PIRSF Lg_Ch_AO 9 770 IPR012400 GO:0046577
Lal1g0530 770 Pfam GMC oxidoreductase 625 757 IPR007867 GO:0016614
Lal1g0530 770 Gene3D - 245 569 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0530 Lal-Chr1 3409579 3415154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0530 82 769 Acyl Lipid Metabolism Gene Families AT3G23410 60.781 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0530 K17756 - gmx:100776182 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0530 1 3409579 3415154 Lal2g0526 2 3167885 3171670 LSH