Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0514 ATGGATTCACGTCCTTTACACATAGCTATGTATCCATGGCTAGCACTTGGTCACCAAACAGCATTCCTTCACCTATGCAACAAGTTAGCAAAAAGAGGTCACAAAATCACATTCTTCACACCTAAAAGAACACAAGCCAAGTTAGAACCATTCAATCTTCACCCTCATCTTATTACTTTTGTTCCTATCACTGTTCCTCATGTTGATGGTCTTCCTCCTAATGCTGAAACAACCACTGATGTGCCTTACCCTTTACAAACACTCATTATGACTGCCATGGATCTAACTCGACATGACATTGAAGCTCATCTTTTTAACCTCAAACCTGAGTTTGTCTTCTATGATTTCACTCATTGGATGCCATCCTTGACACGTCCTTTAGGTATCAAAGCTATCCACTACTGCACTGCTAGTTCTGTGATGGTTGGTTACACTCTTAGTCCTGCAAGATACCATCAAGGAGACAACAAAACCGAAAGTGACCTTATGAAGCCTCCACCAGGGTACCCTGATGCATCAATCAAGCTTCATGCACACGAGGCAAAAGCCTTTTCTTCAAAAAGAAAAGATACATTTGGAAGCAATGTTCTTTTCTATGATCGCCAATATGTGGCATTAAATGAAGCTGATATGTTGGCAGTTAGAACTTGCAGAGAAATTGAAGGACCTTACCTTGATTACTTGGAGGAGCAGTTTAAGAAGTCAGTGGTTCCTACAGGACCAGTTATACTAGAGCCACCTAACAAATGTTTGGAAGAAAAATGGGTTACATGGCTAGGAGGGTATAAACCAGACTCAGTGATTTACTGTTGTTTTGGAAGTGAGTGCAAATTACAGCCAAATCAGTTCCAAGAGTTGTTGCTTGGTCTTGAGCTCACAGGTATGCCATTTTTAGCAGCGTTGAAACCCCCCTTTGGGTTTGAGTCAGTTGAAGAAGCACTCCCAAAAGGGTTTAAAGAGAGGCTTAAAGGAAGAGGTATTGTGCATGGTGGATGGGTTATTCAACAACTGATCTTGGAACACCCATCTGTAGGGTGCTTCATTACACATTGTGGATCAGGTTCTTTGTCAGAAGCATTGGTGAATAAGTGTCAGTTGGTGTTGTTGCCAAATGTTGGTGACCAAATCTTCAATGCAAGGATGATGGGTAACAACTTGCAAGTTGGGGTGGAAGTGATGAAAGGTGAAGATGGGTTCTACACTAAGGAGAGTGTATGCAAAGCTGTGAGTATTGTGATGGATGATGAGAATGAAACAAGCATAAAAGTGAGAGCTAACCATAGTAAAATCAGAAAGATGTTACTTAACAATGATTTAGAGTCATATTATGTTGATAGTTTCTGCAGAAAGCTTCAAGAGATTGTTCAATGA 1371 0.407 MDSRPLHIAMYPWLALGHQTAFLHLCNKLAKRGHKITFFTPKRTQAKLEPFNLHPHLITFVPITVPHVDGLPPNAETTTDVPYPLQTLIMTAMDLTRHDIEAHLFNLKPEFVFYDFTHWMPSLTRPLGIKAIHYCTASSVMVGYTLSPARYHQGDNKTESDLMKPPPGYPDASIKLHAHEAKAFSSKRKDTFGSNVLFYDRQYVALNEADMLAVRTCREIEGPYLDYLEEQFKKSVVPTGPVILEPPNKCLEEKWVTWLGGYKPDSVIYCCFGSECKLQPNQFQELLLGLELTGMPFLAALKPPFGFESVEEALPKGFKERLKGRGIVHGGWVIQQLILEHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQIFNARMMGNNLQVGVEVMKGEDGFYTKESVCKAVSIVMDDENETSIKVRANHSKIRKMLLNNDLESYYVDSFCRKLQEIVQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0514 456 CDD GT1_Gtf-like 6 416 IPR002213 GO:0008194
Lal1g0514 456 Gene3D Glycogen Phosphorylase B; 255 435 - -
Lal1g0514 456 Gene3D Glycogen Phosphorylase B; 2 254 - -
Lal1g0514 456 PANTHER GLYCOSYLTRANSFERASE 2 453 - -
Lal1g0514 456 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 440 - -
Lal1g0514 456 PANTHER UDP-GLYCOSYLTRANSFERASE 79B30 2 453 - -
Lal1g0514 456 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 331 416 IPR002213 GO:0008194
Lal1g0514 456 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0514 Lal-Chr1 3300601 3303178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0514 6 456 Glycosyltransferase AT5G54010 46.460 4.34e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0514 K22794 K12933 gmx:100780270 757.673