Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0501 ATGGATAGCAGTGAAGAACAATCACAACCACAACCACATATAGTACTAGCAATAGATGTTCCTGTGACAAATACTGAAACAATTTGCAAGTCTCAAATTCATATCCAATCTTCATTATCCTCATTTCTAGCACTATTCCATGCAGGGTATTTTAGGATTAGTTTATCTCTTTCTAGCCAAGCCTTATTATTGAAGATCCTTATTCAGCCAATACAAGATGCACATGCTCTTAGGCCTTTATTTTCAATAATACCCTCCACAGCTTTAATTCTCTTATGGTCCCTAGCCTTATTCACATTAGTCACACTCTCTTTTCTCTATGCCCTAAAATGTGTGTTTCATTTTAAAATGGTTAAGGATGAATTCTTAGACCATGTTGGAGTGAACTACCTATTTGTTCCATGGATTTGTTGTCTACTTTTGCTAGAATCTTCACCATTCCTTCACCCAACCACAGTTTATTACCAAATACTTTGGTGGGTGTTTGTGGCTCCAATATTGGTGTTTGATGTAAAGATATATGGTCAGTGGTTTACAAAAGGGAAGAGGTTCCTATCAACAGTGGCAAATCCAACAAGTCAATTATCTGTGATTGGAAACTTGGTTGGTGCACAGGTTGCTGCACAAATGGGTTGGAAGGAGAGTGCAATATGCATGTTTTCTTTGGGTATTGCACATTATTTGGTGCTTTTTGTGACACTGTATCAGAGATTGCCAGGGAATAATAATCTTCCTCCAATGCTACGTCCAGTGTTCTTTTTGTTCTTTGCAGCACCTAGCATGGCAAGCTTGGCTTGGAACTCCATTTCTGGCAAGTTTGATACTGGTTCCAAGATGTTTTTCTTCCTCTCTCTCTTCCTCTTCATATGCCTGGTTTCAAGGCCTCTCCTATTTAAGAAGTCGATGAAGAAGTTCAGTGTAGCATGGTGGGCTTATTCTTTTCCCATAACTGCTTTGGCACTGGCTTCAACACAATATGCACTAGAGGTTGATGGAGTCATGGCTCATGCTATTATGTTGGTGTTATCAACACTTTCTGTTTTGGTGTCTCTTATCTTAATAATTTTCACTGCTCTCAACATTAGAATGCCCTTACCTGCTCAAAACCTTGACTTAACAAAGAAAAGCAATTGTGAAGCAACAGTGCTAGGGACACGAATCCTCTCTTCCAGAATTTTTATGTTCTCATCTCCATAA 1197 0.3885 MDSSEEQSQPQPHIVLAIDVPVTNTETICKSQIHIQSSLSSFLALFHAGYFRISLSLSSQALLLKILIQPIQDAHALRPLFSIIPSTALILLWSLALFTLVTLSFLYALKCVFHFKMVKDEFLDHVGVNYLFVPWICCLLLLESSPFLHPTTVYYQILWWVFVAPILVFDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQVAAQMGWKESAICMFSLGIAHYLVLFVTLYQRLPGNNNLPPMLRPVFFLFFAAPSMASLAWNSISGKFDTGSKMFFFLSLFLFICLVSRPLLFKKSMKKFSVAWWAYSFPITALALASTQYALEVDGVMAHAIMLVLSTLSVLVSLILIIFTALNIRMPLPAQNLDLTKKSNCEATVLGTRILSSRIFMFSSP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0501 398 Pfam Voltage-dependent anion channel 46 357 IPR004695 GO:0016021|GO:0055085
Lal1g0501 398 PANTHER - 5 370 IPR030183 GO:0006873|GO:0008308|GO:0016021
Lal1g0501 398 CDD TDT_SLAC1_like 84 357 - -
Lal1g0501 398 PANTHER OS11G0274300 PROTEIN 5 370 - -
Lal1g0501 398 Gene3D - 41 363 IPR038665 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0501 Lal-Chr1 3218592 3221047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0501 - - gmx:100794114 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0501 1 3218592 3221047 Lal1g0501 1 3218592 3221047 ECH
Lal1g0501 1 3218592 3221047 Lal2g0403 2 2422841 2425067 LSH