Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0477 ATGGCTACCCAACACAACATCAACGGTAACAACTTCGAAGACAATGGGATTGCACTTGCCACCCACTTGGAGTTAGAGCTTGACCCAAATTTGATTGGGGCTAATTGGGTGGAGGAGTGTGAAAAGGTTGGATCTTTTCATGTGGGTTTCCCTATTGAGGAAGCTGTAGAGAAAATCAGTTTAGTTGATGTCTCTCAAACTTGTGTTATGACAACTCATGAGAATGGTAACAAAGATGAGACTAATGGTGAGACTAAAGATGAGACTAAATATGAGATTAAAGATGAAATTAAATCCGAGTCTGAGTCTGAAAGTGAAGGTGAAAGTGAAGAGGATTCAACTTCTGAAGAAAGCAGTAGAAGTAGTAGCAGCAGCAGTGACAGTAATAGTGACAGTGATGGTGATGAAGATGATAAGAAAGAGAAAGGGGAGGTTGAAGAAGGTGAGATTGAAGATTCTGAGGATGATGATGAAAATGAAAGTGATCATAACAAAGACGGGGATAAGATGGTTACTTGGGGCTTGGATGACGGTGATGATGATATTGATGTTCTTGAATTTGATGATGATGATGGTGCAAGAGGAGGAGAACCCATCAGGTCAAAAAATGAGATTGAGAATCTGCCTCCAGTTCCTCCAGTCGAGGTGACCTTAGAGCCACACCATCAAGTGCAGCCTGTGGGAGTTGTTATGTCGATTCTTGGTGCTCAAGTTATTGTGGAAGGAGTGGAAAAGCACGAGCCTCTAAATGAGGGTTCTATTCTCTGGATGACTGAAAACCGAAAACCACTAGGGTTAGTTGATGAAATCTTTGGACCAGTCAAAACTCCTTACTATATAGTGAGATACAATTCTGAAAGTGAAGTTCCTGAGGGTATCCACGCGGGAACTTTGATCTCATTTGTTCCAGAATTTGCAGATTATGTGCTTAATAACAAGGAGGTTTATAAGAAAGGCTACGATGCATCTGGTGCAAATGATGAAGAGCTGTCTGATGAATATGAGTTTTCAGATGATGAGAAAGAGGCTGAGTACAGGAGAATGCAAAGAACAACAAAAAGAGACAAAACTGATCAAAATCAAGGCAAGAGAAAAATCAATAGAAAGAAATCTTCACCTAAACAGAATGTCGCCCCTTCCATCTCTGATACACCTGCACCGACATTGCCCGATCTTGGAAATTCTTCACCTTTTCAAGGCAATTGGCAAGGACATTTTGGGGGACCTACTCTGGCTCCCCATTTTCGGATTCCACCCTCAAATGCAGGTCCTAACTTTGCCACTAGTGGAGTTTGGACAAATGGGACAACACTCCCGCAGCAGCCACAGCCTGCTCTGGCTCCTAATGCATTTCCTAACAATGGCATGCCATGGTACCCACAAAACACTCAATTTCCTCATCGGTTGTCTGTGCCAGGAATGCAATTTCAACAGCAGTTACATCCCAATCAGGGACCTTTTTTGCCAGCCATGTTTCCTGGGGTACTGCCCAATATGTTTGCACAACCCATGAATGCACCAGGGCTTGTTGGTCAAAACCAAATGCAGTTTGGGTTGAACACACCCTTTCAACAGATCCAGCCACCAGTATTTGCTGCACAACAAGGTTTCCCATCTGGTGAATTGCAGTCTCAAGGAAACCTTAATTTGCCTTCCAGTACTGTTCCAGGTGCCCCACCTCAATTTCGTCCTAGGATATCTTCTAATCGTGATAGTCGTGGGGGGAGAACATTTCGTGGAGCAGGTAGGAAAGGGTGGCGACCATCCAGGTGA 1773 0.4365 MATQHNINGNNFEDNGIALATHLELELDPNLIGANWVEECEKVGSFHVGFPIEEAVEKISLVDVSQTCVMTTHENGNKDETNGETKDETKYEIKDEIKSESESESEGESEEDSTSEESSRSSSSSSDSNSDSDGDEDDKKEKGEVEEGEIEDSEDDDENESDHNKDGDKMVTWGLDDGDDDIDVLEFDDDDGARGGEPIRSKNEIENLPPVPPVEVTLEPHHQVQPVGVVMSILGAQVIVEGVEKHEPLNEGSILWMTENRKPLGLVDEIFGPVKTPYYIVRYNSESEVPEGIHAGTLISFVPEFADYVLNNKEVYKKGYDASGANDEELSDEYEFSDDEKEAEYRRMQRTTKRDKTDQNQGKRKINRKKSSPKQNVAPSISDTPAPTLPDLGNSSPFQGNWQGHFGGPTLAPHFRIPPSNAGPNFATSGVWTNGTTLPQQPQPALAPNAFPNNGMPWYPQNTQFPHRLSVPGMQFQQQLHPNQGPFLPAMFPGVLPNMFAQPMNAPGLVGQNQMQFGLNTPFQQIQPPVFAAQQGFPSGELQSQGNLNLPSSTVPGAPPQFRPRISSNRDSRGGRTFRGAGRKGWRPSR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0477 590 MobiDBLite consensus disorder prediction 77 101 - -
Lal1g0477 590 MobiDBLite consensus disorder prediction 340 365 - -
Lal1g0477 590 MobiDBLite consensus disorder prediction 536 590 - -
Lal1g0477 590 MobiDBLite consensus disorder prediction 536 556 - -
Lal1g0477 590 Pfam Gar1/Naf1 RNA binding region 224 308 IPR007504 GO:0001522|GO:0042254
Lal1g0477 590 Gene3D Probable tRNA pseudouridine synthase domain 196 302 IPR038664 -
Lal1g0477 590 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 48 572 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Lal1g0477 590 MobiDBLite consensus disorder prediction 372 403 - -
Lal1g0477 590 MobiDBLite consensus disorder prediction 73 182 - -
Lal1g0477 590 MobiDBLite consensus disorder prediction 147 161 - -
Lal1g0477 590 MobiDBLite consensus disorder prediction 328 416 - -
Lal1g0477 590 MobiDBLite consensus disorder prediction 162 176 - -
Lal1g0477 590 SUPERFAMILY Translation proteins 224 287 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0477 Lal-Chr1 3004872 3011960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0477 K14763 - gmx:102660668 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0477 1 3004872 3011960 Lal1g0477 1 3004872 3011960 ECH