Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0468 ATGGATAATGTGCAAACTTCTGTTGAAGCTAATGATCAAGAATGGAAACAAAGGTGCAACAAGAGGATGGAGAAATTGAAGATTACGCGGATTCCGATTCGCGATGTACCTTTGCAAAAAGGACTAGAGCAGGAGAAACTTCATGAGGAGAAACATATAATGAATTTTGAGTTGTATGAAGCTGTTGAGAATGGAAATGTGGATATGTTTGTTGATGTGGTGGAGCAAGTATTTACAAACACAGAACTAACTTTGTTTGCTATTTTTGATCAAGTAACACCATCAGGTGATTCATTGCTTCATGTGGCAGCTGATTTGGGTAGAGAACAGATTGCAGAGCTAATTGCTTATCATTTTCCTGGACTTCTTTTCGGGACAAACATCAAGCGCGATACTGCACTTCATGCTGCTGCAAGGTTTAAGAACTCTAATGTAATCAAGATCATTCTCTCACAAGTTGAAGGTTTAACGAAATTAACCAATGCAAATGGGGATACTCCTTTGCATGTGGCTGTGTGTAGCAGGCATCTTAGTGCTATTACTGAACTTTTACTTGCAGATAGTCATGTGGTTCATTATTTGAACAATTCGGGTAAATCGCCACTGTATTTGGCCGCTATTACCGGGGATGTGGATATTCTTGATCTTTTATTACAGACTCCATTCCCCTCCAACAAGCCCCTCCCACAGTGTCATGGGAATTCTCCACTTCATGCAGCCATCTTTGAACGAAATTCAGCTATATTGAACGAGATACTAAAGAGAAAACCAGAACTAATTTACTTAAGAGATGAAGATGGAGGGACTTCCCTTCATTATGCAGCATATATTGGTTATGTTGAGGGCGTTCGCATACTGCTAAACATATCTACTCTAACTGCCCTAGAACGAAACACGAAGGGCGACCTTCCTATTCACCTTGCTTGCAAGAGAGGCCATGTTGAAGTGGTTGAAGAATTGCTTCAAAAAGAATGGCCTAATCCTAGAGTTTTCCTAAACTATTTGGGCCAGAACATCCTTCATGTTGCAGCAAAGAATGGAAAAATTAATGTGATAAGGTACCTCTTGAGAAACAAAAAGATTGACTGGTTCACATTAAATGAGAAGGACAACAATGGGGACACTCCATTGCATTTAGCATCAAGAAACTTATTTGTCGGGGTTCTAAATGAAATAGCGCGAGATAAGAGGATTGACGTGAACCTCCTGAACAATGAAGGCTTATCAGCTCATGATGTTGTTGTTTTGATGCATTCTAAATTCCCAAGCACTATTAGAGAGTATTTAGCCCTGGCCATCTTGTCATCTGCCGGCGTACCCCGGATTAAAAAGGCAACTAGTACAATGACTCGCCACAAAGACGACGGGGTCAAGGATGGAATAAGCACACTTATGCTTGTTGCTATACTCATAGCTACAGTGACATTTGTAGCTGGTTTCACCTTGCCAGGTAGTGTCTACAATTTGAACAATCCAGACCCACATAAAAGTTGCATGACAGGTTTGGTTGATAAGCCAATGTTTCAAGTATTCACAATCTGCAACACAATATCAATGTTTAGTTCTACAATTGGGTCCTTTGTTCTCTTATGGGGGCAACTTGGAGATTTCAATTTAGCAGGAAGTGCCTTTATTTTTGCATTGCAAATGGTGGGTGTGGCTCTTATGACCATGTCTTTGGCTTTTATGGCTTCTCTGCGTTTGGTTGCTAGTAACTTCTCATGGCTTGCAAATATCATAACCATTATTGGAAGCTTATTTCTATTGTTGATTGTGTTGCTCTACATTTTATTGATTTTTCCACTCAAATTTCGCCACCCTCTAATTCTATGTCTAGCCAGCCTCTGTATTGAAATTCTGATATTGTTTGATGGAAGTTCAGATAAAGTGATGGTCAAGTTTCAACAAAACAAAAACTCTCAGAAAGTTGACAAGGGCAAAGATCAGTAG 1950 0.3979 MDNVQTSVEANDQEWKQRCNKRMEKLKITRIPIRDVPLQKGLEQEKLHEEKHIMNFELYEAVENGNVDMFVDVVEQVFTNTELTLFAIFDQVTPSGDSLLHVAADLGREQIAELIAYHFPGLLFGTNIKRDTALHAAARFKNSNVIKIILSQVEGLTKLTNANGDTPLHVAVCSRHLSAITELLLADSHVVHYLNNSGKSPLYLAAITGDVDILDLLLQTPFPSNKPLPQCHGNSPLHAAIFERNSAILNEILKRKPELIYLRDEDGGTSLHYAAYIGYVEGVRILLNISTLTALERNTKGDLPIHLACKRGHVEVVEELLQKEWPNPRVFLNYLGQNILHVAAKNGKINVIRYLLRNKKIDWFTLNEKDNNGDTPLHLASRNLFVGVLNEIARDKRIDVNLLNNEGLSAHDVVVLMHSKFPSTIREYLALAILSSAGVPRIKKATSTMTRHKDDGVKDGISTLMLVAILIATVTFVAGFTLPGSVYNLNNPDPHKSCMTGLVDKPMFQVFTICNTISMFSSTIGSFVLLWGQLGDFNLAGSAFIFALQMVGVALMTMSLAFMASLRLVASNFSWLANIITIIGSLFLLLIVLLYILLIFPLKFRHPLILCLASLCIEILILFDGSSDKVMVKFQQNKNSQKVDKGKDQ 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0468 649 ProSiteProfiles Ankyrin repeat region circular profile. 197 219 - -
Lal1g0468 649 ProSiteProfiles Ankyrin repeat profile. 335 358 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 197 226 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 95 124 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 163 193 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 129 158 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 335 363 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 300 330 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 372 402 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 266 294 IPR002110 GO:0005515
Lal1g0468 649 SMART ANK_2a 232 261 IPR002110 GO:0005515
Lal1g0468 649 SUPERFAMILY Ankyrin repeat 90 410 IPR036770 -
Lal1g0468 649 Gene3D - 45 455 IPR036770 -
Lal1g0468 649 ProSiteProfiles Ankyrin repeat profile. 266 288 IPR002110 GO:0005515
Lal1g0468 649 ProSiteProfiles Ankyrin repeat region circular profile. 300 323 - -
Lal1g0468 649 PANTHER MOLTING PROTEIN MLT-4 49 427 - -
Lal1g0468 649 ProSiteProfiles Ankyrin repeat profile. 197 219 IPR002110 GO:0005515
Lal1g0468 649 ProSiteProfiles Ankyrin repeat profile. 300 323 IPR002110 GO:0005515
Lal1g0468 649 PANTHER ANKYRIN REPEAT PROTEIN-LIKE 49 427 - -
Lal1g0468 649 ProSiteProfiles Ankyrin repeat region circular profile. 163 185 - -
Lal1g0468 649 Pfam Domain of unknown function 456 568 IPR026961 -
Lal1g0468 649 ProSiteProfiles Ankyrin repeat region circular profile. 335 358 - -
Lal1g0468 649 ProSiteProfiles Ankyrin repeat profile. 163 196 IPR002110 GO:0005515
Lal1g0468 649 ProSiteProfiles Ankyrin repeat region circular profile. 266 288 - -
Lal1g0468 649 Pfam Ankyrin repeats (3 copies) 189 254 IPR002110 GO:0005515
Lal1g0468 649 Pfam Ankyrin repeats (3 copies) 123 185 IPR002110 GO:0005515
Lal1g0468 649 Pfam Ankyrin repeats (3 copies) 305 401 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0468 Lal-Chr1 2946447 2948786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0468 131 592 Miscellaneous Gene Families AT2G31820 25.895 1.45e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0468 - - aip:107632631 610.912