Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0453 ATGGCTCCCGATCCTAATCGCGCCTCCGATGCCGGAGCCAGCTCCAGCGGCACCGTCAAAGACGACGCCGTCACTAAGAAGAAGGTTGAAAGCGAAGATCTGTCGGATGAGGATTTGGCGTTAAAGCAACAACTTGAGTTATATGTGGAGAGGGTGCAGGACTCTGACCCTGGATTGCAGAAGGTTGCCCTTGAGAGCATGAGACAAGAAATTCGAACTTCAACAAGCTCCATGACATCAGTTCCTAAGCCATTGAAGTTTCTTCGTCCCCATTATGGAACTCTGAAGGCATATTATGAGACTATGGCAGAGTCTGAGTTGAAGAAGTACTTAGCAGACATACTATCAGTATTGGCCCTTACAATGTCTGCTGAGGGAGAACGGGAAAGCCTTAAATTCAGATTATTGGGCTCATCAGGTGATATCGGGTCATGGGGCCATGAGTATGTTAGGAATCTTGCTGGAGAAATTGCACAAGAGTATGCAAAAAGACAGACTGATGAATCTCCCATAGAGGAACTCATGGAACTCGTCCAGCAGATACATAATGCAGAGCCTGAAGCGGTAGATCTTTTGATGGAGGTTGAAGATCTTGACATGTTGATTGAACATGTTGACAAGACTAATTTTAAAAGGACCTGTATATATCTCACCAGTTCAGCTAGATACCTTCCCGGACCAGATGATATGTTAGTCTTGGACATTGCATATTTGATCTATCTAAAATTTGAGCAATATCCAAATGCACTCCAAATTGCACTGTTCCTGGATAATGTGCAGGTGTTTACTTCTTGTGATGATGTTCTGCGAAAGAAGCAATTCTGTTACATGCTTGGACGTCATGGAATTACTTTTGAGCTTGACGAGGAGATGGTCGCTGATGACGAGGACAGAGAGGCATTGCAGGAAATCATAAACAATTCTAAGTTAAGTGAAGGGTATCTGACCCTTGCCCGTGATATTGAAGTTATGGAGCCAAAGTCCCCAGAGGATATATACAAGGCACACTTGCTCGACGGTCGGGCTAGTGCCGGTGCTAGTGTTGATTCAGCTAGACAGAACCTTGCTGCCACTTTTGTTAATGCATTTGTAAATGCTGGTTTTGGCCAGGATAAGTTAATGACTGTCCCATCAGACTCTTCTAGTAGTGGTTCTTCTGGAAATTGGCTTTTCAAAAATAAGGAACATGGGAAAACTAGTGCTGCAGCTAGTCTTGGTATGATTTTACTCTGGGATGTTGATTCTGGTCTTGCACAAATTGACAAGTACTTCCACAGCAATGATAACCATGTCATTGCTGGTGCTTTATTGGGAGTTGGAATTGTCAACTGCAGTATCAAGAATGACTGTGATCCCGCGATGGCACTTCTAGGTGACTACACTGAAAAAGAAGACAGCTCAATCAGGATTGGTGCAATTATGGGTTTGGGAATTGCATATGCAGGTTCTCAGAATGAACAGTTACGTTACAAATTGGCACCCATACTGAATGATGCCAAAGCTTCACTTGACGTGATTGCTTTCACTGCAATTTCATTGGGCTTGATCTATGTGGGTTCTTGCAATGAGGAAGTTGCCCAAGCAATTATCTTCGCTCTAATGGACCGGAGTGAGTCAGAGTTGGGAGAGCCCCTCACACGACTTTTACCTCTTGGTTTAGGTCTTTTATATCTTGGAAAGCAGGAAAGTGTGGAGGCAACTGCCGAAGTTTCCAAGACTTTCAATGAAAAAATTAGGAAGTATTGTGACATGACACTACTATCTTGTGCCTATGCAGGAACAGGGAATGTTCTCAAGGTTCAAAATCTATTGGGTCACTGTTCACAACATCTTGACAAAGGTGAAACTCATCAGGGTCCTGCTGTGCTTGGAATTGCTATGGTAGCAATGGCTGAAGAATTAGGTGTTGAGATGGCAATTCGATCGTTAGAACATCTTCTACAGTATGGAGAGCAAAATATTCGCCGAGCGGTTCCTCTGGCACTTGGTCTACTTTGTATATCAAATCCAAAGGTCAATGTTATGGATACCTTAAGCAGGCTTAGCCATGATACTGATTCCGAAGTAGCAATGGCAGCTGTAATCTCGTTGGGTTTGTTAGGAGCTGGAACCAACAATGCCCGAATTGCTGGCATGCTTCGCAATCTATCAAGCTATTACTACAAGGATACCAGCCTTCTATTTTGTGTGCGAATTGCCCAAGGTCTTGTACATTTGGGAAAGGGTTTATTAACGCTGAATCCATATCATTCTGATCGCCTCCTACTATCACCGACAGCGCTTGCTGGACTAATTACCATGTTGCATGCTTGCCTTGATATGAAAGCAATCGTGTTAGGAAAATACCACTACGTACTCTACTTCCTTGTTTTGGCAATGCAGCCGAGGATGGTATTGACAGTGGATGAGAACTTAAAGCCTTTATCAGTGCCTGTTCGTGTTGGTCAAGCAGTGGATGTTGTTGGCCAGGCAGGTCGTCCTAAAACAATCACTGGTTTCCAAACCCACTCCACCCCTGTCCTTTTGGCTGCTGGAGACAGAGCAGAGCTAGCAACAGAAAAGTATATTCCCATCTCCCCAATTCTTGAAGGTTTTGTAATTTTGAAGGAGAATCCAGATTATAGGGAAGAGTGA 2634 0.4385 MAPDPNRASDAGASSSGTVKDDAVTKKKVESEDLSDEDLALKQQLELYVERVQDSDPGLQKVALESMRQEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMAESELKKYLADILSVLALTMSAEGERESLKFRLLGSSGDIGSWGHEYVRNLAGEIAQEYAKRQTDESPIEELMELVQQIHNAEPEAVDLLMEVEDLDMLIEHVDKTNFKRTCIYLTSSARYLPGPDDMLVLDIAYLIYLKFEQYPNALQIALFLDNVQVFTSCDDVLRKKQFCYMLGRHGITFELDEEMVADDEDREALQEIINNSKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDSSSSGSSGNWLFKNKEHGKTSAAASLGMILLWDVDSGLAQIDKYFHSNDNHVIAGALLGVGIVNCSIKNDCDPAMALLGDYTEKEDSSIRIGAIMGLGIAYAGSQNEQLRYKLAPILNDAKASLDVIAFTAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPLTRLLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCSQHLDKGETHQGPAVLGIAMVAMAEELGVEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLLGAGTNNARIAGMLRNLSSYYYKDTSLLFCVRIAQGLVHLGKGLLTLNPYHSDRLLLSPTALAGLITMLHACLDMKAIVLGKYHYVLYFLVLAMQPRMVLTVDENLKPLSVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGDRAELATEKYIPISPILEGFVILKENPDYREE 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0453 877 Pfam RPN1 N-terminal domain 45 337 IPR040892 -
Lal1g0453 877 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 HOMOLOG 21 876 - -
Lal1g0453 877 MobiDBLite consensus disorder prediction 1 37 - -
Lal1g0453 877 SUPERFAMILY ARM repeat 42 741 IPR016024 -
Lal1g0453 877 MobiDBLite consensus disorder prediction 21 37 - -
Lal1g0453 877 Pfam 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal 821 874 IPR041433 -
Lal1g0453 877 Gene3D - 340 783 IPR011989 -
Lal1g0453 877 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 21 876 - -
Lal1g0453 877 PIRSF 26S_protsm_Rpn1 2 877 IPR016643 GO:0000502|GO:0030234|GO:0042176
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0453 Lal-Chr1 2842072 2851002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0453 K03028 - gmx:100799779 1550.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0453 1 2842072 2851002 Lal1g0453 1 2842072 2851002 ECH