Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0434 ATGGAGAAAAAGGTAAAATGGAGTTGGAGCAGTGCCATAATCGGAGCAGCATCAGCAGTAGCAGCCTCCGCAATCCTATCAGCAAAACCAAAAGACCCAACCTTTCATCTTATCTCTATCTCCTTCACTTCCTTCAAACTCAACCTCCCACTCCTCGACGCCGATCTTCTCCTCACCGTCCACGTCACCAACCCTAACATCGTCCCTATCAACTACTCCGCCGCCACCATGTCCATCTTCTACCACGGCTCCCTTCTCGGTTCCGCTCAAGTCCAAGCTGGCTCTCAACCACCGCGCTCTTGCCAGCTCCTCCGCTTACCTGCTCGCCTTAACGGTCTCCAAATGGCTCAACATGCGGTTACCTTTGTTTCTGATTTGGCTAAGCGAGAAATGATTATTGACGCAACCGTTGATATTGGTGGCACCGCTAAGGTTCTGTGGTGGGATCATAGCTTTATGATACACGTGGATAGCCATATCACCGTTGATCCTGTGTTCCTTGATGTTATTGATCAGGAAAATTCTTCTGAACTTGAGGTTTTCGCTCCATCTGCTTAA 558 0.491 MEKKVKWSWSSAIIGAASAVAASAILSAKPKDPTFHLISISFTSFKLNLPLLDADLLLTVHVTNPNIVPINYSAATMSIFYHGSLLGSAQVQAGSQPPRSCQLLRLPARLNGLQMAQHAVTFVSDLAKREMIIDATVDIGGTAKVLWWDHSFMIHVDSHITVDPVFLDVIDQENSSELEVFAPSA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0434 185 SMART why 40 153 IPR013990 GO:0009269
Lal1g0434 185 Gene3D - 13 163 - -
Lal1g0434 185 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 170 - -
Lal1g0434 185 Pfam Late embryogenesis abundant protein 59 149 IPR004864 -
Lal1g0434 185 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 170 - -
Lal1g0434 185 SUPERFAMILY LEA14-like 19 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0434 Lal-Chr1 2705851 2706408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0434 - - lang:109325473 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0434 1 2705851 2706408 Lal1g0434 1 2705851 2706408 ECH
Lal1g0434 1 2705851 2706408 Lal2g0357 2 2135634 2136218 LSH