Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0430 ATGGACCAGCTTCCTGTTGAAGTTATTGGGAACATACTGTCCCACCTAAGGGTAGCTGGTGATGTAGTCATCGCCTCTGCGACTTGCCGCAAATGGAGGGAAGCATGCTGTAAACACCTCCACACACTCTCCTTCAGCTCCAATGATTGGCCTATTTACCGCGATTTGAAGACTACCCGCCTCGAGATTTTGATCACACAAACCATTTTCCAGACGTCAGGGTTGCAGGCCCTCTCCATTTTGATGGAAGATGTGGATGAATTCTCAGCCTCAACTGTTATTGCTTGGCTCATGTACACCAGGGAAAGCTTGAGGCAATTGTTTTATAACGTAAAGACTACACCTGATGTTAACATTCTTGAAATATGTGGCAGACATAAGCTGGAAATACTAGATCTGGCTCATAATTCAATCATTGGGGTTGAGCCTAATTATCAGAGGTTCCCTTGTTTGAAATATCTTTCATTGAGTTATGTCAGTATCTCAGCGTTGGATCTGCATCTTTTGGTGTCTGCCTGTCCAAAGATTGAGGTTTTGAAGCTTGTCAATCCAGAGATTGCTATGTCTGATGCACAAGTCACTATTGAATTGAGTAGTTCAACTCTGAAGAAAGTATATGTAGAAGCAATCAGTTTGGACAAGTTTATATTGGAGGCTGATGGTATTGAATGTTTGCACTTGAAAGATTGTGCACTTGAGGTTTTTGAGCTCATTGGCAAGGGAGCCTTGAAGCATTTTAAGATTGATGATGTTAGTGTTATACATCTTGATATTGGGGAGACAGTTGAGAATCTTGAGGTTGTGGATATCAGCAACTTCACAATTATATGGCCAAAATTCTACCAGATGATTTCAAGATCATCAAATTTAAAGAGACTCCGGCTTTGGGATGTGATGTTTGACGATGAGGATGAGATTGTAGATTTAGAAACAATTGCCACTTGCTTTCCGCATCTGAGCCATTTATCTCTAAGTTACGATGTCAGGGATGGAGTGCTTCACTATGGTTTACAAGGTTCTTCCTGTCTGGAGAATGTTGTTGTCTTGGAGCTTGGCTGGACTGTGATCAATGAGCTTTTCTCCCACTGGGTTGAGGGATTGCTTAAGCGATGCCCCAATCTCAAGAAGTTGGTCATTCACGGGGTAGTTTCAGAGGCTAAGACTGATGAAGAATGCAAAATGTTAGCCAATTTCACAACATCCATGGTTAAGCTGATGAGGAGATACACACATGTAGATCCACATTTTAAGTATGAATAG 1260 0.4175 MDQLPVEVIGNILSHLRVAGDVVIASATCRKWREACCKHLHTLSFSSNDWPIYRDLKTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVIAWLMYTRESLRQLFYNVKTTPDVNILEICGRHKLEILDLAHNSIIGVEPNYQRFPCLKYLSLSYVSISALDLHLLVSACPKIEVLKLVNPEIAMSDAQVTIELSSSTLKKVYVEAISLDKFILEADGIECLHLKDCALEVFELIGKGALKHFKIDDVSVIHLDIGETVENLEVVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEIVDLETIATCFPHLSHLSLSYDVRDGVLHYGLQGSSCLENVVVLELGWTVINELFSHWVEGLLKRCPNLKKLVIHGVVSEAKTDEECKMLANFTTSMVKLMRRYTHVDPHFKYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0430 419 Pfam F-box-like 2 39 IPR001810 GO:0005515
Lal1g0430 419 PANTHER - 1 417 - -
Lal1g0430 419 SUPERFAMILY RNI-like 37 382 - -
Lal1g0430 419 SUPERFAMILY F-box domain 1 53 IPR036047 GO:0005515
Lal1g0430 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Lal1g0430 419 Gene3D - 2 40 - -
Lal1g0430 419 Gene3D Ribonuclease Inhibitor 144 409 IPR032675 -
Lal1g0430 419 PANTHER F-BOX PROTEIN-LIKE 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0430 Lal-Chr1 2686769 2688028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0430 - - gmx:100786847 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0430 1 2686769 2688028 Lal1g0430 1 2686769 2688028 ECH
Lal1g0430 1 2686769 2688028 Lal9g0329 9 2199282 2202086 LSH