Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0422 ATGGAATTGGGAAGCATCACCCAATTCCTTCATGACAAGAATGTTTTGGTCGTTGGTGCCACTGGCTTCCTTGCCAAAATTTTTGTGGAGAAGGTACTGAGAGTGCAACCAAATGTTAAGAAACTTTATCTCCTTTTGAGAGCCAAAGATGCTGAATCTGCCACACGACGATTGCAAAATGAGATTATACGAAAGGATCTATTTAGATTGTTGAAGGAAAGTCATGGTGCAAAATTCAATTCCTTTATCTCAAAAAAGTTAACTTTGGTGCCGGGAGACATTTCACAAGAGGACTTGAATTTGAAAGACTCCGTTCTACAAGAAGAGATTTACAATCAAATTGATGTTATAGTTAATTTGGCAGCAACAACTAACTTTGATGAAAGATACGATGTCGCGTTGGGTATAAATACATTTGGAACTAAGCATGTCTTCAACTTTGCCAAAAAATGTGTTAAACTCGAGGTGCTTGTCCACGTGTCAACAGCATATGTATGTGGTGAGAGAGGAGGACTCATAGTAGAAGATCCAACCAAATTTGGTGTATCACTAAATGGAATCCCTGGACTAGACATTGATGTAGAAAAGAAAGTGGTGCAAGAGAAGTTGAAACAGCTTCAAGATGAAGGAGCCACAGAAGATGAAATTAAAATATCCATGAAGGACTTAGGCATGAAAAGAGCAAGTATATATGGATGGCCAAACACATACGTATTTACAAAGGCAATGGGAGAAATGCTTGTGGGGACAATGAAGGAAAACATGTCAGTTGTTATTGTGCGTCCTACAATAGTTACAAGCACTTATAGAGAACCATTCCCTGGTTGGGTTGAAGGTGTAAGAACCATAGACAGTATCATTGTTGCTTATGGTAAAGGAAAATTAGCATGCTTCCTTGCGGATCTAGATGCAGTATTTGATGTGATACCAGCTGACATGGTAGTGAATGCAATGCTTGCTGCTATGGTGGCTCATGCTAATCACCCTTGTGACACAATATATCAAGTGGGTTCCTCTGTTTCAAATCCAATCAGATACCTCAATCTTCAAGACTATACCTACAGATATTTCATTGCAAAACCATGTCTTGACAAGGAAGGTATCCCTATCAAAGTTAGCAAAGTTAGAGTGTTGGATAACATGGCTAGCTTCCAAAGATATATGTTCATTCGTTACTTGCTCCCATTAAAGGGGCTAGAGCTAGCAAATGCAGCTTTATGCCAATATTTTCAGGGAACATATCTTGATATGAGCAGAAAGATCAATATTGTGATGCGGTTGGTTGAACTTTACAGGCCTTACATTTTCTTCAATGGCATATTTGATACTATGAACACAGAAAAGTTGCAGATATCAGCAAGACAAGGTGGAACAGAGATGGATTTGTTTTACTTTGACCCAAAAATTATTGATTGGGAAGACTACTTTTTGAATATTCACATTCCTGGCATTGTTAAATATGTCTTCAAGTGA 1473 0.3829 MELGSITQFLHDKNVLVVGATGFLAKIFVEKVLRVQPNVKKLYLLLRAKDAESATRRLQNEIIRKDLFRLLKESHGAKFNSFISKKLTLVPGDISQEDLNLKDSVLQEEIYNQIDVIVNLAATTNFDERYDVALGINTFGTKHVFNFAKKCVKLEVLVHVSTAYVCGERGGLIVEDPTKFGVSLNGIPGLDIDVEKKVVQEKLKQLQDEGATEDEIKISMKDLGMKRASIYGWPNTYVFTKAMGEMLVGTMKENMSVVIVRPTIVTSTYREPFPGWVEGVRTIDSIIVAYGKGKLACFLADLDAVFDVIPADMVVNAMLAAMVAHANHPCDTIYQVGSSVSNPIRYLNLQDYTYRYFIAKPCLDKEGIPIKVSKVRVLDNMASFQRYMFIRYLLPLKGLELANAALCQYFQGTYLDMSRKINIVMRLVELYRPYIFFNGIFDTMNTEKLQISARQGGTEMDLFYFDPKIIDWEDYFLNIHIPGIVKYVFK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0422 490 CDD FAR-N_SDR_e 13 361 - -
Lal1g0422 490 Pfam Male sterility protein 392 490 IPR033640 -
Lal1g0422 490 CDD FAR_C 390 489 IPR033640 -
Lal1g0422 490 Pfam Male sterility protein 18 318 IPR013120 -
Lal1g0422 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 338 IPR036291 -
Lal1g0422 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Lal1g0422 490 Gene3D - 7 370 - -
Lal1g0422 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0422 Lal-Chr1 2625012 2628429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0422 112 489 Acyl Lipid Metabolism Gene Families AT4G33790 60.317 4.38e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0422 K13356 - gmx:100793197 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0422 1 2625012 2628429 Lal1g0422 1 2625012 2628429 ECH
Lal1g0422 1 2625012 2628429 Lal9g0320 9 2104759 2108230 LSH