Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0408 ATGGAAAAGCTTTTTCATTCTGTAATTCTTTTTGTTCTATTCCTTGGACTACTATTTCATGGAGGAATAGCAACATATATGAAGTCCCAAGATGGATCAGAGGAATGGGGTTATGTACAAGTCAGACCCAAAGCACACATGTTCTGGTGGCTATACAGAAGTCCCTATAGAGTGGAAAATCCCTCAAAGCCATGGCCAATTATTCTTTGGTTGCAGGGAGGACCTGGTGCTTCAGGAGTTGGGGTTGGAAATTTTGAAGAGTTTGGTCCTTTAGACACCCTTTTGAAGCCTAGGAATTCCACATGGTTGAAAAAAGCAGATCTTCTGTTTGTGGACAATCCAGTTGGAACTGGGTACAGTTTTGTGGAGGAAGATGGCCTCTTTGTGAAAACAGATGTGCAAGCTGCCACTGATTTGACTACATTGTTAATAAAAATATTCAATAGAGACAAAAAACTTCAAAAGAGTCCTCTATTCATTATGGCAGAGTCTTATGGAGGCAAATATGCTGTTACTCTTGCATTATCTGTCTTTAAAGCTATTAAAGAAAAGAGATTGAATCTTATACTTGGAGGTGTGGCATTAGGAAATAGTTGGATCTCACCCGAAGATTATGTGTTTTCATGGGGCCCTCTGCTTAAAGATGTCTCACGAATCGATGAAAATGGACTGCAAAAATCAAACAGTATAGCTCTAAAGATCAAGCAACAACTCAAGGATGGTAAATTTAACGAAGCAACCACCTCATGGGGTGAACTTGAAAACGTGATTAGCAGTAGCAGCAACGATGTGGACTTTTACAATTTTTTGCTGGATTCTGGAAGTGTTTCAGCAACCTTATCAGCAATGGAGCCGGAATTATTTAGAGAAATATCAAAAAAACGGTATTCTAATTATCTTTCTTCCAAGAGGGTGAGATCTTCTACTCCTGGTCTTACTGGTGATCTAGCAGAGTTACTAGACGGTCCCATAAAAAAGAAATTAAGGATCGTCCCTAAGAATGTAACATGGGGAGAACAATCTAATAATGTTTTTGCCGCTCTTTCAACTGATTTTATGAAGCCAAGAATTAATGAGGTTGATGAATTATTGGCTAATGGAGTCAATGTTACTGTATACAGTGGACAAGTTGATCTGATTTGTGCAACCAAGGGGACTGAAGCTTGGATTAGGAAACTCAAGTGGAAAGAACTTCAAACATTCTTAGGGAAAGAAAGAACACCCCTCTATTGTGGAAGTGATAGAGAAACCAAAGCCTTTTATAGGTCATACAAAAACCTACATTTCTATTGGATCCTTAAAGCTGGTCATTTTGTACCCACTGATCAGCCATGCGTAGCATTAGACATGGTGGGTGCAATCACAGGTTCACCTGCGGCAGAGAAGTGA 1389 0.3945 MEKLFHSVILFVLFLGLLFHGGIATYMKSQDGSEEWGYVQVRPKAHMFWWLYRSPYRVENPSKPWPIILWLQGGPGASGVGVGNFEEFGPLDTLLKPRNSTWLKKADLLFVDNPVGTGYSFVEEDGLFVKTDVQAATDLTTLLIKIFNRDKKLQKSPLFIMAESYGGKYAVTLALSVFKAIKEKRLNLILGGVALGNSWISPEDYVFSWGPLLKDVSRIDENGLQKSNSIALKIKQQLKDGKFNEATTSWGELENVISSSSNDVDFYNFLLDSGSVSATLSAMEPELFREISKKRYSNYLSSKRVRSSTPGLTGDLAELLDGPIKKKLRIVPKNVTWGEQSNNVFAALSTDFMKPRINEVDELLANGVNVTVYSGQVDLICATKGTEAWIRKLKWKELQTFLGKERTPLYCGSDRETKAFYRSYKNLHFYWILKAGHFVPTDQPCVALDMVGAITGSPAAEK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0408 462 Gene3D alpha/beta hydrolase 22 460 IPR029058 -
Lal1g0408 462 SUPERFAMILY alpha/beta-Hydrolases 33 456 IPR029058 -
Lal1g0408 462 ProSitePatterns Serine carboxypeptidases, serine active site. 160 167 IPR018202 GO:0004185
Lal1g0408 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 456 IPR001563 GO:0004185|GO:0006508
Lal1g0408 462 PANTHER CARBOXYPEPTIDASE 9 456 - -
Lal1g0408 462 Pfam Serine carboxypeptidase 31 452 IPR001563 GO:0004185|GO:0006508
Lal1g0408 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 98 110 IPR001563 GO:0004185|GO:0006508
Lal1g0408 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 121 IPR001563 GO:0004185|GO:0006508
Lal1g0408 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 171 IPR001563 GO:0004185|GO:0006508
Lal1g0408 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0408 Lal-Chr1 2509564 2515275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0408 K09646 - gmx:100808412 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0408 1 2509564 2515275 Lal1g0408 1 2509564 2515275 ECH
Lal1g0408 1 2509564 2515275 Lal2g0323 2 1940854 1957538 LSH