Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0405 ATGGCATTACCACACTCTACCTCTGCTTTAGCAACCATAGTAACACTTTCATCACCGATAACCAAATCTTTCAAGTCTCTTCCCGTTTTGTCCTTCACAAAGGAACCTTTTTTCACCAAACAAACCATACCCAGAAGAAAAAAAAGAAATTTTTCCCTAACCCCTTTACGCGTCGCTTCGCCAACAACAACAATTGAATCAGATCAATCGTATATAGAAGCAGAAAGGGGCGAGTTTGATGATGAATTTGATGATGAAACCTCGTCCTCAAAGTTTTCATGGAGGGATCACTGGTACCCAGTTTCGTTAATTGAAGATCTGAATCCGAATTATCCCACACAATTTCAGCTTCTGGGACGTGAAATTGTGATCTGGTACGATAAATTGAACTCAGGATGGGTTGCTTTAGATGACAAATGCCCCCACCGTCTTGCCCCTTTATCTCTTTTGAGGGAAGAGAGTGGAAGGATTAATGAAGAGGAAAAGTTTTCTTCTGATAAGAAAATGAGTATTTGGTTTTTGCAGGAAGGAAGAATTGATGAAGATGGAAACTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGGTGTGGAAGCTGTGTTAAGATCCCTCAGGCTATGTCTGAAGGTCCCGAAGCTCGCGCCGTTCGGTCTCCAAGAGCATGTGCTACTAGATTCCCTACCTTGGTATCTCAGGGCTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCTAATGCCTCAAAACCTCCATTGTTGCCTGATGATTTTGAAAAACCAGAGTTTGCTACAGTGAACATTCAGCGTGATCTGTTCTATGGCTATGATACTCTCATGGAGAATGTCTCTGACCCTTCTCACATTGATTTTGCTCATCACAAGGTTACAGGAAGGAGAGACAGAGCCAAGCCTCTGACATTCAAGATGGATTCTCGTGGTCCATGGGGCTTTGCAGGAGCTAATGATGGGAACCCAAAGATCACTGCTAAATTTATTGCACCATGTTATTCTATGAACAAAATTGAGATCGATACTAAACTCCCAATAGTTGGGGACCAGAAATGGGTAATATGGATATGTTCATTCAATATCCCCATGGCACCTGGTAAGACGCGATCCATTGTCTGCAGTGCTCGAAACTTCTTCCAGTTCACAGTGCCAGGGCCTGCCTGGTGGCAAGTGGTTCCTAGATGGTATGAACATTGGACTTCAAACAAGGTATATGATGGAGATATGATTGTTCTCCAAGGTCAAGAGAAAATATTTCTGACAGCAACTAAAGATGGTGGTGACATTAATAAACAGTACACAAACATCACCTTCACACCAACGCAAGCCGATCGCTTTGTCCTCGCATTTCGAAATTGGCTGAGACGACATGGCAACAGCCAACCAGAATGGTTCGGAACAGTCGACCAGCAGCAGTTGCCATCAACAGTTTTATCGAAACGTCAGATGTTGGATAGATTTGAACAGCACACACTAAAGTGTTCATCATGTAAAGGAGCTTATGAGGCATTCCAAATATGGCAAAAAATCCTAATTGGTGCAACAGTTTTCTTTGGTGCAACATCAGGGATCCCATCAGATATTCAGTTGCGTGTAATCTTGGCTGCACTTGCACTTGCCACTGCAGGCTTAGCTTTTGCACTTAACCAACTCCAAAACAATTTTGTATTCATTGATTATATTCATGCTGAAATTGATTAA 1716 0.4248 MALPHSTSALATIVTLSSPITKSFKSLPVLSFTKEPFFTKQTIPRRKKRNFSLTPLRVASPTTTIESDQSYIEAERGEFDDEFDDETSSSKFSWRDHWYPVSLIEDLNPNYPTQFQLLGREIVIWYDKLNSGWVALDDKCPHRLAPLSLLREESGRINEEEKFSSDKKMSIWFLQEGRIDEDGNLQCSYHGWSFDGCGSCVKIPQAMSEGPEARAVRSPRACATRFPTLVSQGLLFVWPDENGWEKANASKPPLLPDDFEKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLTFKMDSRGPWGFAGANDGNPKITAKFIAPCYSMNKIEIDTKLPIVGDQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFTVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLTATKDGGDINKQYTNITFTPTQADRFVLAFRNWLRRHGNSQPEWFGTVDQQQLPSTVLSKRQMLDRFEQHTLKCSSCKGAYEAFQIWQKILIGATVFFGATSGIPSDIQLRVILAALALATAGLAFALNQLQNNFVFIDYIHAEID 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0405 571 CDD Rieske_RO_Alpha_PaO 81 248 - -
Lal1g0405 571 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 26 160 - -
Lal1g0405 571 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 169 571 - -
Lal1g0405 571 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 98 237 IPR017941 GO:0051537
Lal1g0405 571 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 26 160 - -
Lal1g0405 571 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 169 571 - -
Lal1g0405 571 Pfam Pheophorbide a oxygenase 333 427 IPR013626 GO:0010277
Lal1g0405 571 Gene3D - 168 263 IPR036922 GO:0051537
Lal1g0405 571 Gene3D - 264 467 - -
Lal1g0405 571 Pfam Rieske [2Fe-2S] domain 97 206 IPR017941 GO:0051537
Lal1g0405 571 SUPERFAMILY Bet v1-like 232 466 - -
Lal1g0405 571 Gene3D - 93 163 IPR036922 GO:0051537
Lal1g0405 571 SUPERFAMILY ISP domain 91 243 IPR036922 GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0405 K13071 - gmx:100812162 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0405 1 2492500 2496915 Lal1g0405 1 2492500 2496915 ECH