Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0400 ATGTTGGAGCAAAAAAGACCCCCAAAGAGTGCTACTAGAGGGTTCTATGTTAAGATGAAAATCCTTCACAAACATGGAAGGCCTCAACAAGAAAAAAATTCTTGTTGTTTCTACACCTATTACAAATGGCTTCTTTGGCTCTCTCTATCCCTTTATTTCTTCACCTCATATCTCATCACCAACAACAACAACAACTCAAGAAACACCAGAGTACTCTCAGAATTAGAATCCACAAACACCACCACAACTCCACTAATTACAAATTTAAAGGACCAACAACAAAGTAATAGTAATTCTTTGTTGAAGAATATGAAGGTGTTTGTGTATGATTTACCACCAAAATACAACACGGTTTGGCTTCAAAATGAAAGGTGCAACACTCATTTGTTTGCATCAGAGGTTGCTATTCATAGAGCAGTATTGAGTTCTGAAGTTCGAACCTTTGACCCTTATGATGCTGACTTTTTCTTTGTCCCAGTTTATGTTTCTTGTAACTTCAGCGCCGTCAATGGCTTCCCCGCGATTGGTCACGCGCGCTCTCTAATCGCGTCAGCAGTTAAACTCATATCCGAAGAATACATATTTTGGAACCGAAGCAGAGGCTCCGACCATGTTTTCGTTGCGTCCCACGATTTTGGCTCTTGTTTTCACACTCTGGAGGACGTGGCAATGGAAGATGGGGTGCCAGAAATAATGAAGAACTCCATTGTGTTACAAACGTTTGGGGTTGTTAACAAACATCCGTGTCAAGAGGTTGAGAATGTTGTGATACCGCCGTATGTTTCGCCGGAAAGTATACGGAACACGATGAAGAATGCTCCGATGAATCGGCGGCGAGATATTTGGGTGTTCTTCAGAGGCAAAATGGAGCTCCATCCTAAAAACGTTAGTGGACGATTTTACAGCAAGAAAGTGCGCACGGTGATATGGCGCAAATTCAACGGTGATCGGAGGTTTTACCTGCAAAGGCATAGGTTTAGCGGTTACCAGTCAGAGATTGCTCGCTCTGTTTTCTGTCTATGTCCTTTAGGGTGGGCCCCATGGAGTCCAAGACTGGTTGAATCAGTCGCTTTAGGTTGCGTACCGGTTGTTATAGCGGATGGTATCCGGTTGCCCTTTGCCTCCGCCGTGAGATGGGCCGATATATCAGTCACGGTGGCGGAGAAGGATGTGGGCAACCTGGCGGATATACTTGAGCACGTGGCGGCGACAAACTTGAATGAAATACAAAGAAACTTGTGGGACCCAATGACTAGAAGGGCTCTGCTTTTCAATAATGAGGTCATTGAAGGTGATGCCACGTGGCAGGTGTTGCGTGCATTGAGTGAGAAGCTGGATAGGTCTTATAGAAGCTCCAGGGTTTCACGCCAATTGGAATCTGACACGTAA 1389 0.4464 MLEQKRPPKSATRGFYVKMKILHKHGRPQQEKNSCCFYTYYKWLLWLSLSLYFFTSYLITNNNNNSRNTRVLSELESTNTTTTPLITNLKDQQQSNSNSLLKNMKVFVYDLPPKYNTVWLQNERCNTHLFASEVAIHRAVLSSEVRTFDPYDADFFFVPVYVSCNFSAVNGFPAIGHARSLIASAVKLISEEYIFWNRSRGSDHVFVASHDFGSCFHTLEDVAMEDGVPEIMKNSIVLQTFGVVNKHPCQEVENVVIPPYVSPESIRNTMKNAPMNRRRDIWVFFRGKMELHPKNVSGRFYSKKVRTVIWRKFNGDRRFYLQRHRFSGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFASAVRWADISVTVAEKDVGNLADILEHVAATNLNEIQRNLWDPMTRRALLFNNEVIEGDATWQVLRALSEKLDRSYRSSRVSRQLESDT 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0400 462 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 30 452 IPR004263 GO:0006486|GO:0016757
Lal1g0400 462 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 30 452 - -
Lal1g0400 462 Pfam Exostosin family 102 400 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0400 Lal-Chr1 2458891 2461802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0400 K20889 - gmx:100818569 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0400 1 2458891 2461802 Lal1g0400 1 2458891 2461802 ECH
Lal25g0201 25 1371680 1374159 Lal1g0400 1 2458891 2461802 PCT
Lal1g0400 1 2458891 2461802 Lal25g0201 25 1371680 1374159 PCT