Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0398 ATGGAGAAGGTGATGAACATTCTGAAGCCGAAGGCAAATCCACAGCAGCTGTTGAGAGATTGGCAGCGCAAGCTTCGGCAAGAGTGTCGCAACATTGAACGCCAAATTCGCGATATACAGAGAGAAGAAAAGAACGTACAAAAGGCGATTAGAGAAGCGGCCAAAAGGAACGATATGGGTTCTGCGAAGGCACTTGCTAAGGAACTTGTGAGGTCTAAGAGAACAGTGAACCGTCTCTTTGAAAATAAGGCACAATTGAATTCAATATCAATGCACCTTGGAGAGAGTGTTGCAATTGCTCGTACAGTGGGACATCTGTCTAAGAGCGCCGAGGTTATGAAGCTTGTCAATAACCTCATGAAGGCTCCTCAAATGGCCGTGACAATGCAAGAGTTCAGCAAAGAAATGACGAAGGCAGGAGTTATTGAGGAGATGGTAAATGATGCTGTTGACTCAGCACTTGATTCTGAGGACATAGAAGATGAGATAGAAGAAGAAGTTGATAAAGTCTTAACTGCAATAGCTGGCGAGACAGTGGCACAGCTTCCTGACGCTGTCAGGAAAGAAAAGGTAAAGCAACCTGCTCAAAGGGTTGGAGCTGCAGACAAGGAAGAGGCTATAGCTGAGGGTGTTGATGATGAGGAAGAAATGGAAGAAATAAGGGCTCGACTTGCTAAGGTTAGGTCTTGA 690 0.4536 MEKVMNILKPKANPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAKELVRSKRTVNRLFENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPQMAVTMQEFSKEMTKAGVIEEMVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETVAQLPDAVRKEKVKQPAQRVGAADKEEAIAEGVDDEEEMEEIRARLAKVRS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0398 229 Pfam Snf7 21 188 IPR005024 GO:0007034
Lal1g0398 229 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 229 IPR005024 GO:0007034
Lal1g0398 229 MobiDBLite consensus disorder prediction 190 215 - -
Lal1g0398 229 Coils Coil 18 59 - -
Lal1g0398 229 MobiDBLite consensus disorder prediction 190 206 - -
Lal1g0398 229 Gene3D - 9 185 - -
Lal1g0398 229 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 3 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0398 Lal-Chr1 2437843 2442750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0398 K12193 - gmx:100781929 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0398 1 2437843 2442750 Lal1g0398 1 2437843 2442750 ECH