Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0386 ATGGCCGGTAAAGGTGGAGCAAATCCGGCGACATACTCGCCGTCTCCGACCATTCAGAAAAAGAAAGCTCCGTTATTCAAAGAAGATTGGGTCCGACCCGATGGCCGCGGTTTCCATCAGTGTAGACCTGCATTTTTTAGAACTGGTGCTGTGAATGCTGCATCTGGATCTGCTTATGCAGAGTTTGGGAATACCAAGGTCATTGTATCTGTATTTGGGCCAAGAGAGAGTAAGAAGGCGATGATGTACAGTGATACAGGGCGCCTGAATTGCAATGTCAGCTTTACAACATTTGCTACTCCAGTTCGTGGACAGGGTTCAGACCACAAAGAGTACACTGCTATGCTTCATAAAGCTTTGGAGGGTGCAATAATACTGGAATCTTTCCCCAAAACAACTGTGGATGTTTTTGCATTGGTGCTGGAATCCAGTGGCAGTGATCTCCCAGTTGTCATATCATGTGCCAGCCTTGCCTTGGCAGATGCTGGAATAATGATGTATGACCTTGTTGCCTCAGTTTCAGTGTCATGTGTCAGTAAGAACCTTGTCATTGATCCTATTTTTGAGGAGGAAAACTACCAAGATGGAAGCTTAATGATTACTTGCATGCCTTCTCGCTACGAAATCACCCAACTCACAGTTACTGGGGAATGGTCCACCCCAAAGATTAATGAGGGAATGCAGCTGTGCCTGGATGCTTGTGCAAAGCTTGCTAAGATTATGAGGTCATGTTTGAAAGAAGCTGCGTCTGATTCAAAGGAATAG 765 0.4562 MAGKGGANPATYSPSPTIQKKKAPLFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSFTTFATPVRGQGSDHKEYTAMLHKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSCVSKNLVIDPIFEEENYQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKIMRSCLKEAASDSKE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0386 254 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 195 IPR020568 -
Lal1g0386 254 Gene3D - 18 253 IPR027408 -
Lal1g0386 254 CDD RNase_PH_MTR3 41 247 - -
Lal1g0386 254 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Lal1g0386 254 PANTHER EXOSOME COMPLEX COMPONENT MTR3 18 249 - -
Lal1g0386 254 Pfam 3' exoribonuclease family, domain 2 168 228 IPR015847 -
Lal1g0386 254 PANTHER EXOSOME COMPLEX COMPONENT 18 249 - -
Lal1g0386 254 SUPERFAMILY Ribonuclease PH domain 2-like 166 251 IPR036345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0386 Lal-Chr1 2355880 2359822 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0386 K12587 - gmx:100819105 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0386 1 2355880 2359822 Lal1g0386 1 2355880 2359822 ECH