Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0384 ATGGGTTTTGGTAGAAACTCATGTATGAGATCAAGCGGAGATTCCTTAGATGGAATGCTTAATGACTATGTTGGAGGAAAGAACAAAATGAAGAGTCAAAAAAGTGGTTCTACAAAATTTGTGGCAGCTCTTACATGTCTTCAATTTTTCTTTGCAGTTTATGCAACATTCCTATTGTACTACATGGGTCCTTCTATTGATCTAAGAACTAGTCCAGATTTCACATGGGCTACAAGAATTGCACAACAATGGAAGCAACTCATGATCACACCCCATGTTGTTGGTCATTACCAACAAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCATCAAGGAAGGATTTCAACCCATAAATCCTTCCCTTGTATGTGAGAATGAGAAGATTGATTTCATGCAAAAGAAGTCCAATGATGTACAAATGATCAAGTTGAAGAGAGAGTTATACAATGAGGTATTGGACTTTCAAAGTAAGAATTTTGGAACTGAGACACTTGCTGAGTTAATGGCAATGAAATCCAAATGGGATTTGCATGGTCCTAAGAAGCCAAAAATTACTGTTTTATTAAACCACTTCAAGAGAAAAACACTTTGTGCTCAAATTGATTCTTTGCTCCAACAAACCCTTCCATTCTATCATGTTTGGGTGCTTTCATTTGGAAGCCCCAATGAGTTATCTTTGAAAAGAATTGTAGAGAGCTACAATGATTCAAGAATCAGCTTTATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGAGGCTGATTTGGTGTATATTGTTGATGATGACATGATTCCTGGTAAGAAGATGTTGCAGATTTTGGCACATGTGGCTGGGACAGAAAAGTACAAGAACTCTGTGTTGGGAAGTATTGGAAGGATATTGCCATTTAGACAGAAAGATTTCACATTCCCAAGTTACAGAAAGTTTAGATCTAAAGAAGCAGGGCTTTATTTGCCTGATCCTGCTTATGATATCACAATTCATAAAATTGTGCAGGTGGACTTTCTATCCAGCTCTTGGTTCTTATCTGCTGAGCTTGTCAAAACACTCTTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTTCACCTCAGCTATCAGCTTCAGAAGTATAGAAATGCTGGGTCATATGTTCTTCCAGTAGACCCTAAAGACAAGGAAACATGGGGTGATAGTGAACACAGGCTTGCATATGTGTCAGAAACCACAGTGATTTTCAAGGACATAGTTCAAGTAAGAGATGACCAATGGTGGAAAGCACTCTCCACAGGTTATGTGACACAGTGGGCAGCAATGCACCCTCAAAAGGTTGATGCACTCTTTTATGCTCACACAGTTGATGAAGTAAAAGCACTTGCACCTCTTCTTGAAAAGTTCAGGTACACAGTTGGCAAAAAAGCCTACATTGTTGTATCTGGAGGAAACTTCTGCCCTTGTGAAAATGCTGCTGCAGCTCTCAAATGGCCTATGTTGGTTTGTAAAGAGAGGCGTTTTAAGATTTTTGATTTGGCGCTTGGAGCACTTTCTGGAGTGTCAAACTCAGAGGTGCCAGTAGTACAGGCAGTGTACTCCAGCATGAAGGGTTTGATCAAAATTCATAATCCTAGTGTGGTAATTACTGCAGCTGACATTGACCCTAATGTGAAAAAGGCTTTGAAGATGGCATCAGAAACAAATTCAAATGGCACCACACTTGTTCTTTTGCCAAGGGCTTCAGTGTCTAAAGTTCTTTGGATGGCCGATCTGCGTTCAACAGCTTTACCAAATTGGAATAAGATGCAGATTTCTATCAACATCATTACCCAAAACAGAGTTAATTCACTAGCAAGGCTTCTCAAGTCTCTCACCAATGCTTACTATCTTGGAGATGAAGTTCCTATTACCTTCAACATGGATAGCAAGGTAGATGAGGCAACTATAAAATTACTAGGTTCATTGGAGTGGCCTCATGGGCCTAAAACCTTAAGAAGGAGAATCATCCAAGGAGGGCTTATAAGAGCAGTGAGTGAGAGTTGGTACCCTTCTTCTGATGATGACTTTGGACTCTTACTTGAAGATGACATTGAAGTTTCTCCATACTACTATTTATGGATCAAATATGCACTCTTGGCTTACCACTATGACCCTCAAGTCTCACTCCCTGAACTTTCATCTATCTCTCTCTACACTCCAAGGATTGTTGAAGTTGTCAAAGAAAGGCCTAAATGGAATGCTACAGAGTTCTTCAGACCAATCCATCCCAACACACCTTACCTTCACCAATTACCTTGTAGTTGGGGAGCAGTGTTTTTCCCTAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGAATGCTAAAGAAAACCCGGTTCAAATTCCGAAGTCTAGAACAAATGGTTGGCAAGCATCATGGAAAAAGTTCCTAATAGACATGATGTACCTTAGAGGTTATGTTAGTCTATATCCAAATTTCCCTAACCAAGCTAGCTTTTCAACCAACCATATGGAACCAGGGGCACATATTAGTGCTAAAGATAATGTTGTTAAGCATAACAAACAGGACTTTGAGGTGCCATTGTTGAAGGAAGACTTCAGAAACTTTTTACCAGGAATGAAAATGCCTCCAGCATCAAAACTACCATCTTTGAATCTCTTCAACCAACCACTTTCTCTAAAGGGTCTTAAGGCTGCTGGAGCTAAGTTGGGTCAAGATGTGCTTAGATGTAACAATGTCACTGAGCTAGTAACTGTGGATCATCATACAGGTCTACCACAAAGTTGCACCAAATTCTGA 2829 0.398 MGFGRNSCMRSSGDSLDGMLNDYVGGKNKMKSQKSGSTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTSPDFTWATRIAQQWKQLMITPHVVGHYQQASSSSSSSSSSSSLIKEGFQPINPSLVCENEKIDFMQKKSNDVQMIKLKRELYNEVLDFQSKNFGTETLAELMAMKSKWDLHGPKKPKITVLLNHFKRKTLCAQIDSLLQQTLPFYHVWVLSFGSPNELSLKRIVESYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITIHKIVQVDFLSSSWFLSAELVKTLFIETPFTFSTGEDLHLSYQLQKYRNAGSYVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMHPQKVDALFYAHTVDEVKALAPLLEKFRYTVGKKAYIVVSGGNFCPCENAAAALKWPMLVCKERRFKIFDLALGALSGVSNSEVPVVQAVYSSMKGLIKIHNPSVVITAADIDPNVKKALKMASETNSNGTTLVLLPRASVSKVLWMADLRSTALPNWNKMQISINIITQNRVNSLARLLKSLTNAYYLGDEVPITFNMDSKVDEATIKLLGSLEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQVSLPELSSISLYTPRIVEVVKERPKWNATEFFRPIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENAKENPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLLKEDFRNFLPGMKMPPASKLPSLNLFNQPLSLKGLKAAGAKLGQDVLRCNNVTELVTVDHHTGLPQSCTKF 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0384 942 PANTHER OSJNBA0004B13.7 PROTEIN 28 942 - -
Lal1g0384 942 PANTHER - 28 942 - -
Lal1g0384 942 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 174 397 IPR029044 -
Lal1g0384 942 SUPERFAMILY Nucleotide-diphospho-sugar transferases 606 793 IPR029044 -
Lal1g0384 942 CDD Glyco_tranf_GTA_type 198 289 - -
Lal1g0384 942 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 608 857 IPR029044 -
Lal1g0384 942 SUPERFAMILY Nucleotide-diphospho-sugar transferases 185 386 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0384 Lal-Chr1 2340443 2344922 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0384 - - gmx:100790938 1702.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0384 1 2340443 2344922 Lal1g0384 1 2340443 2344922 ECH
Lal1g0384 1 2340443 2344922 Lal2g0298 2 1745409 1749044 LSH