Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0382 ATGTTTTGGAAGCTCGCCTCTATCTCCGACTCCTCTCCCCTACAGGTTGAGGCGATATTAGACAATGAAAATTTTACCTTGGAAGAGCTTCTTGATGAAGAGGAAATAATCCAGGAATGCAAGGCCTTAAACAGCCGTCTTATCAACTTTCTGAGAGATAGAGCTCAGGTTGAGCAATTGCTACGCTACATCATTGAAGAACCACCAGAAGATGCTGAACACAAACGGGTCTTCAAGTTTCCTTTCATTTCCTGTGAGATATTTACATGTGAAATTGATGTCATTTTGAAGACTTTGGTGGATGAAGAAGAGCTCATGAACTTGTTATTCTCCTTCTTAGAGCCTGACCGATCTCATAGTTCCTTACTGGCTGGGTACTTTAGCAAGGTTGTTGTTTGCCTAATGATGCGAAAGACCGTGCCACTTATGAATTATGTTCAAGCCCATCAGCATGTTTTTCGCCAACTGGTTGATTTGATAGGAGTTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGACCATGTATATCCCAATTTTGTAGATGTGATGCAATGGTTGGCTGAGAGCAACCTTCTAGAGATGATTGTTGATAAACTAAGTCCATCCAGTTCTTCTCAAGTTCATGCCAATGTAGCCGAAACATTATGTACAATAACTAGAGTTGCATCATCTAGTCTAGCCATTAAACTTTCAAGTCCAAGTTTTGTTGCAAAAGTTTTGGGTTATGGATTGGAAGATTCACAATCAAAGTCTAGCCTTGTGAACTCACTTTCAGTGTGCATTTCTATGTTGGATCCCAAAAGATCAGCTGTTTCGTCTTCACTTTTTCATTCATATCGAAGTCAAAACATGTATGAGCCACCGATTCCTGTAAACCCTGATACTATTGGTGCAATGCTCCCTAAACTTGGTGAGTTGGTTGTGCTTTTGGACGTGTCATCCGATGAAAAGGTATTGCCTACAACATATGGTGAATTAAAACCTCCACTTGGAAGGCATCGATTGAAGATTGTGGATTTCATTGCAGTACTTATAAAAACTGGAAATGAAGTGGCAGAAAATGAATTGGTTAACTCTGGAACCATTCGACGAGTCATTGATCTTTTCTTTGAGTATCCATACAATAACGCATTGCACCACCATGTAGAAAGTATCCTATTATCATGTTTAGAGAGCAAAACTCATGTCATTGTTGACCATCTCCTTCCAGAGTGTGATTTAATTGGGAGGTTTCTCCAAGCAGATAAGAATTGTCTTCTTTCTGCTGAAAGCAATCAGCCAACAGTAGGTGCTGCTGGAAAACGGGCTCCGCGGGCAGGAAACATTGGACATATTACTCGAATTGTTAATAAACTTGTTCACTTAGCTCATAACCAAAGCCATATACTGGCATGTCTTCAGGAAAATAGTGAGTGGAATGAATGGCAAGCTACAGTTCTCCAGAACCGTAATGTGATTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCAACTGCATTACAAGGTAGGATGAGGGATAGCGATGATGATGACCTTCATGACAGAGACTACGATGTCACAGCTTTAGCAAATAATTTGAGTCAGGCTTTTGGATACAAAATTTATGGGAACGAGGATAATGAAGAGAAACGTGACAATATGGATCGAGATGAAGAGGATGTCTACTTTGATGATGATTCTGCTGAGGTAGTCATATCGTCTCTAAGACACAGTGATGATCAAGGGAGTAGTCTGTTTACAAATTCGAACTGGTTTGCATTCCAAGATTATATAATTGGTGATGCACCTAGGGACAACACATCTTCCTCGGAGATGATGGATGATGTAAACTTGAATGGAAATGCAACTGGTGTTAGCAATATTGGTGACAATGAGGTAGTGGTTGGAGAGGAAGAAGAATTGACTGATAGCAAAAGTACTGTGAATGGTACATCTAGCCAACGTACAAACTTGATTGGATTAACCGCTAGCAAGTCCATGAATGGAGGTGCTGACTCTGAAAGTGAGAAGGCAAGTGCTTCAAATGATACGGGACTCTTCAGGTTTGAGTCTCCAGACAATGAGGCCTTGTTTGGGGATAGGCCTTCACCTGATTGGGTGGGATGTGGTGAACCCTCAGATATACAAGTTGCAGGCTCAAGCTTGAACCACTTTTTGGATCATGATGAGTCTACTAGTAATCCTCAAGTAGGCAGCTGTAATCTGAGTTCTCCTTCAAATGGAGAATCTATACCTTCTAATGGATCGCCAACTATTACTGATTTGGTCGAGGGAGATCAAGACTTGAGTCAAAGATCAGTACCAGTACCCTCATTATTTGACGAGGATGTTGAATTTGTTGGTGTGGAATTAGAAGGCACTGAGAAAGCAATGGAACAGACTCTCCAAGAAGGGATAGTTGGAGAAGCAGGGGCATTAAAAAGAAACATAGCCCCAAAAGTGCCTGAAAAGGAAAACTCTGAAGATGGCAGTCCTAGAATGAAGGACTTCAATGATGCAAATTATTGGAGGGTTGATCAAGAGGTTGCTGTTCTGGACTAA 2553 0.4125 MFWKLASISDSSPLQVEAILDNENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLRYIIEEPPEDAEHKRVFKFPFISCEIFTCEIDVILKTLVDEEELMNLLFSFLEPDRSHSSLLAGYFSKVVVCLMMRKTVPLMNYVQAHQHVFRQLVDLIGVTSIMEVLVRLVGADDHVYPNFVDVMQWLAESNLLEMIVDKLSPSSSSQVHANVAETLCTITRVASSSLAIKLSSPSFVAKVLGYGLEDSQSKSSLVNSLSVCISMLDPKRSAVSSSLFHSYRSQNMYEPPIPVNPDTIGAMLPKLGELVVLLDVSSDEKVLPTTYGELKPPLGRHRLKIVDFIAVLIKTGNEVAENELVNSGTIRRVIDLFFEYPYNNALHHHVESILLSCLESKTHVIVDHLLPECDLIGRFLQADKNCLLSAESNQPTVGAAGKRAPRAGNIGHITRIVNKLVHLAHNQSHILACLQENSEWNEWQATVLQNRNVIENVHRWACGRPTALQGRMRDSDDDDLHDRDYDVTALANNLSQAFGYKIYGNEDNEEKRDNMDRDEEDVYFDDDSAEVVISSLRHSDDQGSSLFTNSNWFAFQDYIIGDAPRDNTSSSEMMDDVNLNGNATGVSNIGDNEVVVGEEEELTDSKSTVNGTSSQRTNLIGLTASKSMNGGADSESEKASASNDTGLFRFESPDNEALFGDRPSPDWVGCGEPSDIQVAGSSLNHFLDHDESTSNPQVGSCNLSSPSNGESIPSNGSPTITDLVEGDQDLSQRSVPVPSLFDEDVEFVGVELEGTEKAMEQTLQEGIVGEAGALKRNIAPKVPEKENSEDGSPRMKDFNDANYWRVDQEVAVLD 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0382 850 MobiDBLite consensus disorder prediction 658 710 - -
Lal1g0382 850 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 848 IPR007587 GO:0019903|GO:0043666
Lal1g0382 850 Pfam SIT4 phosphatase-associated protein 133 359 IPR007587 GO:0019903|GO:0043666
Lal1g0382 850 Pfam SIT4 phosphatase-associated protein 360 492 IPR007587 GO:0019903|GO:0043666
Lal1g0382 850 MobiDBLite consensus disorder prediction 814 836 - -
Lal1g0382 850 MobiDBLite consensus disorder prediction 658 685 - -
Lal1g0382 850 MobiDBLite consensus disorder prediction 815 836 - -
Lal1g0382 850 MobiDBLite consensus disorder prediction 722 759 - -
Lal1g0382 850 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0382 Lal-Chr1 2312859 2322357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0382 K15501 - gmx:100805409 1343.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0382 1 2312859 2322357 Lal1g0382 1 2312859 2322357 ECH
Lal1g0382 1 2312859 2322357 Lal2g0296 2 1727442 1737919 LSH
Lal1g0382 1 2312859 2322357 Lal9g0275 9 1701897 1718443 LSH
Lal8g0148 8 1002923 1012724 Lal1g0382 1 2312859 2322357 PCT
Lal1g0382 1 2312859 2322357 Lal8g0148 8 1002923 1012724 PCT