Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0312 ATGAGAACCACTCTTGCTTCATCACATGTACTTTTTGTGGCTTTCCTCCTTGCAACAAGTTTTCTATGGACCTTTCCTGAAATTGCTGTGGCAACTTCAAACCATGGAAGCGTTACAAGGCACTACAACTTTGATATAAGGTTGAAAAATGTTACGAGGCTGTGCCAAACAAAGAGCATGGTTACCGTGAATGGGAAGTTCCCAGGGCCTCGTGTTGTTGCTAGAGAAGGGGACAGATTAATTGTTAGGGTGGTTAACCATGTTCCAAACAATATAAGCATCCATTGGTATAAACATTTTTTATCAACTAAGAATCTTATGATGGATGATAACAAAACCAGGCATGGAGTGAGACAGCTTCAAAGTGGATGGTCGGATGGACCATCTTACATAACTCAATGCCCCATTCAAACTGGCCAAAGCTATGTGTACAACTTCACCATTGTTGGGCAAAGAGGAACTCTGTTTTGGCATGCACACTTTTCATGGTTAAGAGCCACTTTGTATGGACCCCTAATACTCCTTCCTGGGCATAATGAATCTTATCCATTTGTCAAACCCTACAAGGAAGTTCCCATCCTTTTTGGTGAGTGGTGGAAGGTGGATCCAGAGGCTGTTATTGCAGAAGCCCTTCAGACAGGGGGTGGCCCAAATGTCTCTGATGCCTACACCATTAATGGACTTCCTGGGCCTCTCTACAATTGCTCCAGTAACGCTACTCAGCATGAGACATTCAGGTTAAAAGTGAAACCAGGGAAAACATATCTTCTTCGTTTGATCAATGCTGCACTCAACGATGAACTCTTTTTCAGCATTGCAAACCACACCTTAGTCACTGTTGAAGCTGATGCTACATACGTTAAACCTTTCAAATCCAACGTCATTGTCATTACACCAGGGCAAACCACTAATGTTTTGTTAAACACAAAACCTCATTACCCAAACACCACTTTCTTCATGCTAGCAACCCCATATTTCACAGGTTTGGGCACCTTTGATAATTCCACAGTGGCTGGCATTCTAGAGTACACTAACCCATTTGGTAGTATCAATGCTCCTAATTTGAAACCTACACTTCCAGCAACAAATGCTACATCATTTGTTGCAAACTTCAGTAGCAAACTTCGCAGTTTGAACAATGCAAAGTACCCTTCTAACGTGCCTCAAAATATTGGCAAGAGTTTCTTCTTCACGGTAGGAATTGGATCAAGTCCATGCCCAAAAAACCAATCATGTCAAGGACCAAATAATAGTTCAAAATTTGCAGCCTCTATGAACAATATATCTTTTGCTCTACCTTCAGTAGCACTTCTCCAACAACATTATTTGTTTAGGGAGAATAATAAAAGTGTTTATACTACAGATTTCCCAGTTGTACCTCTTGATCCATTCAACTATACAGGGACTCCACCAAATAACACTAGGGTCAGTAATGGAACAAAGACTGTGGTGATACCTTATAATACAAGTGTGCAGGTTGTGTTGCAGGACACTAGCATTTTGGGAGCTGAGAGCCATCCTTTCCACCTTCATGGGTTCAATTTCTATGTTGTGGGTCAAGGCTTTGGGAACTTTAATTCTAGTGCAGACCCTGCAAAGTTCAATCTTGTTGACCCTGTGGAGAGGAACACTGTTGGTGTACCCTCTGGTGGTTGGCTTGCAATTCGATTCCTTGCTGACAACCCAGGTGTTTGGTTGATGCATTGCCACTTTGATGTGCACCTAAGTTGGGGGTTAAGGATGGCTTGGATTGTTGAAGATGGGAAACTCCCTAATCAGAAGTTGCCTCCTCCACCACCTGATCTCCCAAAATGTTGA 1818 0.4235 MRTTLASSHVLFVAFLLATSFLWTFPEIAVATSNHGSVTRHYNFDIRLKNVTRLCQTKSMVTVNGKFPGPRVVAREGDRLIVRVVNHVPNNISIHWYKHFLSTKNLMMDDNKTRHGVRQLQSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRATLYGPLILLPGHNESYPFVKPYKEVPILFGEWWKVDPEAVIAEALQTGGGPNVSDAYTINGLPGPLYNCSSNATQHETFRLKVKPGKTYLLRLINAALNDELFFSIANHTLVTVEADATYVKPFKSNVIVITPGQTTNVLLNTKPHYPNTTFFMLATPYFTGLGTFDNSTVAGILEYTNPFGSINAPNLKPTLPATNATSFVANFSSKLRSLNNAKYPSNVPQNIGKSFFFTVGIGSSPCPKNQSCQGPNNSSKFAASMNNISFALPSVALLQQHYLFRENNKSVYTTDFPVVPLDPFNYTGTPPNNTRVSNGTKTVVIPYNTSVQVVLQDTSILGAESHPFHLHGFNFYVVGQGFGNFNSSADPAKFNLVDPVERNTVGVPSGGWLAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLPPPPPDLPKC 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0312 605 Gene3D - 188 381 IPR008972 -
Lal1g0312 605 PANTHER LACCASE 10 605 - -
Lal1g0312 605 CDD CuRO_2_LCC_plant 191 343 IPR034285 -
Lal1g0312 605 Gene3D - 409 605 IPR008972 -
Lal1g0312 605 ProSitePatterns Multicopper oxidases signature 1. 563 583 IPR033138 -
Lal1g0312 605 Gene3D - 24 175 IPR008972 -
Lal1g0312 605 CDD CuRO_3_LCC_plant 451 588 IPR034289 GO:0005507
Lal1g0312 605 SUPERFAMILY Cupredoxins 187 605 IPR008972 -
Lal1g0312 605 Pfam Multicopper oxidase 467 588 IPR011706 GO:0005507|GO:0016491
Lal1g0312 605 Pfam Multicopper oxidase 48 175 IPR011707 GO:0005507
Lal1g0312 605 Pfam Multicopper oxidase 190 345 IPR001117 -
Lal1g0312 605 PANTHER MULTI-COPPER OXIDASE 10 605 IPR045087 -
Lal1g0312 605 SUPERFAMILY Cupredoxins 388 605 IPR008972 -
Lal1g0312 605 ProSitePatterns Multicopper oxidases signature 2. 568 579 IPR002355 GO:0005507
Lal1g0312 605 SUPERFAMILY Cupredoxins 36 203 IPR008972 -
Lal1g0312 605 TIGRFAM laccase: laccase 39 605 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lal1g0312 605 CDD CuRO_1_LCC_plant 42 176 IPR034288 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0312 Lal-Chr1 1897171 1901605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0312 K05909 - gmx:100811833 994.571