Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0293 ATGTACAAATTCATTTCAAACCTTTACTCTTTCATTTTCATTTTCATTTTCATTTTGTACTTAGTGATTATACAATGTGAGTGTGTAGTTGAAGCAGTGTTGTCTAAGAAGAAAAAGAAAATGCTGAAGCCACCACAGTCACAAGACTTTGCCCTGAAGGAGACCTCACCTAACATTGGAGCAGGGGCAGTGACATGGAATAAGAACAAGCTATCCTCTACCTATGACCTGGTTGAACAGATGCAGTACCTCTATGTCCGAGTGGTGAAGGCCAATGATTTGCCTGCAAAGGATCTAACAGGCAGTCTTGATCCATATGTTGAAGTGAAGCTTGGAAACTACAAGGGACGAACCAGGCATTTCGAGAAGAAGTCCAATCCTGAGTGGAATCAGGTATTTGCTTTCTCCAAAGATCGGATTCAAGCTTCGGTTTTGGAGGTGGTTGTCAAGGATAAAGATGTTGTTTCTGATGACTTTGTCGGGAGGGTTTGGTTTGATCTGAATGAGATCCCAAAACGTATTCCCCCAGACAGCCCTTTGGCTCCGCAGTGGTATAGGCTGGAGGATCGAAAAGGCCTTAAAGTTAAGGGAGAGTTAATGCTTGCAGTTTGGATGGGAACTCAAGCAGATGAGACATTTCCTGATTCATGGAATTCTGATGCAGCAACCATTAGCTCTGATGAGATTGCGAGCATTAGATCAAAAGTTTACCTCTCACCCAAGCTTTGGTATGTTAGGGTAAATGTAATTGAGGCTCAGGACTTGATACCAAGTGACAAGACCCGGTATCCTGAAGTTTATGTGAAGGCTAATATAGGGAATCGGATTTTAAGAACTCGAGTATCCCAAAGTAAGACCTTGAATCCCATTTGGAATGAGGACTTGATGTTTGTTACTGCTGAGCCATTTGAAGAGCCTCTAGTTCTGTCTGTGGAAGATAGATTTGGACCGAATAAAGATGAAATCCTGGGAAGGTGTGTGATTCCGTTACACATAGTGCAGAGGAGGTTAGACCACAAGCCTGTGAACACTAGGTGGTTTAATCTTGAGAAGAATGTGGTTGTTGAAGGGGAGAAGGAGACCAAATTTGCAAGCAGGATACATTTAAGGGTATGTTTGGATGGAGGGTACCACGTGTTGGACGAGTCTACTCATTACAGTAGTGATCTTAGGCCAACTGCCAAGCAGCTATGGAAGTCTAGCATTGGAATTCTAGAAGTCGGGATTATAAGTGCCCACGGTCTTATGCCAATGAAGACGATAGATGGTAGAGGAACCACAGATGCTTATTGTGTGGCGAAATATGGTCAGAAGTGGATCAGGACGAGGACAATTGTAGATAGCTTTGCTCCAAAGTGGAATGAGCAGTACACTTGGGAAGTTTTTGATCCATCTACTGTTATAACAGTAGGGGTCTTTGATAATGGTCATTTACATGGAGGAGACAAATCTGGTGGATTAAGGGATTCGAGGATAGGGAAGGTGAGAATTAGGCTATCTACTCTTGAAGCAGGTAGAGTTTACACACACTCTTATCCTCTTATAGTGCTGCATAACTCCGGTGTGAAGAAAACAGGAGAAGTGCAGTTGGCTGTGAGGTTCACAAACTCATCTTTTGTCAATATGATGTTTATGTATTCCCAACCACTGTTGCCAAAGATGCACTACATCCATCCTCTTTCTGTGATTCAGCTAGACAGTCTGAGGCATCAGGCCATGCAGATTGTGTCAATGAGGTTGATCAGGGCCGAGCCACCACTAAGGAAAGAGGTTGTGGAATACATGCTTGATGTGGATTCACATATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGAATAATGAAAGTTCTAGGAGCGTTGATAGCCTTTGGGAGGTGGTTTGATCAAATATGCAATTGGAAAAACCCAATCACAACCATACTAATTCACACCCTTTTCATAATATTGGTTCTTTATCCAGAGCTAATACTTCCCACAATTTTCTTGTACCTGTTCTTGATCGGAATTTGGAACTTCAGATGGAGGCCAAGACACCCTCCACACATGGACACTAGACTTTCTCATGCTGATGCTGCTCATCCTGATGAATTAGATGAAGAGTTTGATACATTCCCAACTTCCCGTCCACCGGATATCGTTAATATGAGATATGATCGTTTAAGAAGCATTGCAGGAAGAGTCCAGAGTGTTGTAGGTGACCTGGCAACTCAAGGAGAAAGGTTTCTAAGTCTCCTAAGCTGGAGAGATCCAAGGGCTACTTCTCTTTTTTTAACATTCTGTTTAATTGCTGCTATAGTTCTCTATGTTACTCCCTTTCAGGTTTTATGCTTTCTCTATGGCTTCTACATGCTTCGGCATCCGAGATTCCGCCACAAACTTCCATCAGTACCCCTCAACTTCTTTAGAAGGTTGCCGGCTAGATCAGACAGCATGTTGTAG 2445 0.4274 MYKFISNLYSFIFIFIFILYLVIIQCECVVEAVLSKKKKKMLKPPQSQDFALKETSPNIGAGAVTWNKNKLSSTYDLVEQMQYLYVRVVKANDLPAKDLTGSLDPYVEVKLGNYKGRTRHFEKKSNPEWNQVFAFSKDRIQASVLEVVVKDKDVVSDDFVGRVWFDLNEIPKRIPPDSPLAPQWYRLEDRKGLKVKGELMLAVWMGTQADETFPDSWNSDAATISSDEIASIRSKVYLSPKLWYVRVNVIEAQDLIPSDKTRYPEVYVKANIGNRILRTRVSQSKTLNPIWNEDLMFVTAEPFEEPLVLSVEDRFGPNKDEILGRCVIPLHIVQRRLDHKPVNTRWFNLEKNVVVEGEKETKFASRIHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWKSSIGILEVGIISAHGLMPMKTIDGRGTTDAYCVAKYGQKWIRTRTIVDSFAPKWNEQYTWEVFDPSTVITVGVFDNGHLHGGDKSGGLRDSRIGKVRIRLSTLEAGRVYTHSYPLIVLHNSGVKKTGEVQLAVRFTNSSFVNMMFMYSQPLLPKMHYIHPLSVIQLDSLRHQAMQIVSMRLIRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLGALIAFGRWFDQICNWKNPITTILIHTLFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRPPDIVNMRYDRLRSIAGRVQSVVGDLATQGERFLSLLSWRDPRATSLFLTFCLIAAIVLYVTPFQVLCFLYGFYMLRHPRFRHKLPSVPLNFFRRLPARSDSML 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0293 814 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 45 814 - -
Lal1g0293 814 Pfam Plant phosphoribosyltransferase C-terminal 659 814 IPR013583 -
Lal1g0293 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 403 544 IPR035892 -
Lal1g0293 814 ProSiteProfiles C2 domain profile. 386 512 IPR000008 -
Lal1g0293 814 Pfam C2 domain 243 349 IPR000008 -
Lal1g0293 814 Pfam C2 domain 403 514 IPR000008 -
Lal1g0293 814 Pfam C2 domain 83 185 IPR000008 -
Lal1g0293 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 243 394 IPR035892 -
Lal1g0293 814 CDD C2B_MCTP_PRT_plant 83 207 - -
Lal1g0293 814 Gene3D C2 domain 228 373 IPR035892 -
Lal1g0293 814 Gene3D C2 domain 64 205 IPR035892 -
Lal1g0293 814 CDD C2C_MCTP_PRT_plant 244 392 - -
Lal1g0293 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 83 220 IPR035892 -
Lal1g0293 814 ProSiteProfiles C2 domain profile. 65 185 IPR000008 -
Lal1g0293 814 Gene3D C2 domain 401 538 IPR035892 -
Lal1g0293 814 ProSiteProfiles C2 domain profile. 223 347 IPR000008 -
Lal1g0293 814 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 45 814 - -
Lal1g0293 814 SMART C2_3c 83 179 IPR000008 -
Lal1g0293 814 SMART C2_3c 244 342 IPR000008 -
Lal1g0293 814 SMART C2_3c 404 511 IPR000008 -
Lal1g0293 814 CDD C2D_MCTP_PRT_plant 404 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0293 Lal-Chr1 1739598 1742759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0293 41 814 Lipid Metabolism Gene Families AT3G57880 81.314 0.0 1339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0293 - - gmx:100788273 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0293 1 1739598 1742759 Lal1g0293 1 1739598 1742759 ECH