Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0286 ATGTTTGTCGTTTCCGCTACTCCTCTTTGTTGGTTTTGGCTTGGAACAAATCAAAATCAAAGAGTGTTGATGTCTCATACATCAAAACCATGCTTCTCTGAACCCCTTCTTCCTTCCAATACCAACATACCCTCCTCCGTTGTTGAAGCTTCCAACTCTTCAATGTCTCAACTTCGTGTCTATAAAGTTGGTCTACCTGATATTGAAGAATTTGCATACAAAGGGGAAAATCAATTGAATCAATCTAGTAAATCAGCAGTGGGCTCAGAAGTGACTCTGATGGAAAGTGAAGTTGCTTCTTGTAGACTCAGTGGTGAATCACCTGCTCACTGGGAAAAGGTGCTTGAGGGGATTCGCAAAATGAGGTGCTCTGCAGATGCACCAGTAGACACTATGGGATGTGAGAAAGCTGGTGCTACTTTACCTCCAAAGGAAAGAAGATTTGCTGTCCTGGTATCTTCTCTTTTATCAAGCCAAACCAAGGATCATGTTAATCACGTTACAAGTGTGTTTTTAAGAATAGGAGCAATCCAACGTCTTCTTCAAAATGGTCTGCTTACTCCTGACGCGTTGAACGATGCTGATGAAGAAACCATCAAAAAGTTGATATACCCTGTTGGGTTCTATACAAGAAAAGCCACTAATTTGAAAAAAATTGCAAATATTTGTCTCATGAAGTATGATGGAGACATACCTAGTTCACTTGAGCAACTACTCTTACTCCCAGGAATAGGTCCTAAGATGGGTCATTTGGTTATGAATGTTGGATGGAACAATGTCCAAGGGATTTGTGTCGATACTCATGTCCACCGCATTTGCAATCGGCTGGGATGGGTGTCAAGATTAGGCACAAAACAGAAAACTTCAACACCCGAAGAAACAAGAGAGGCGCTGCAACGTTGGCTTCCAAGGGAAGAATGGGATCCAATAAATCCTCTTTTGGTGGGTTTTGGACAGACGATTTGTACTCCGCTACGACCTCGCTGCGCCGAATGCGGTATAAGTGAGTTGTGCCCAGCGGCATTTAAAGACACCTCAGCCTCATCTTCCAAGTCCAAAAACTATAGACTCAAGAAGAAGCTTTAA 1086 0.4254 MFVVSATPLCWFWLGTNQNQRVLMSHTSKPCFSEPLLPSNTNIPSSVVEASNSSMSQLRVYKVGLPDIEEFAYKGENQLNQSSKSAVGSEVTLMESEVASCRLSGESPAHWEKVLEGIRKMRCSADAPVDTMGCEKAGATLPPKERRFAVLVSSLLSSQTKDHVNHVTSVFLRIGAIQRLLQNGLLTPDALNDADEETIKKLIYPVGFYTRKATNLKKIANICLMKYDGDIPSSLEQLLLLPGIGPKMGHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTSTPEETREALQRWLPREEWDPINPLLVGFGQTICTPLRPRCAECGISELCPAAFKDTSASSSKSKNYRLKKKL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0286 361 Gene3D Hypothetical protein; domain 2 138 255 - -
Lal1g0286 361 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 55 353 - -
Lal1g0286 361 Pfam HhH-GPD superfamily base excision DNA repair protein 152 302 IPR003265 GO:0006284
Lal1g0286 361 SMART endo3end 156 320 IPR003265 GO:0006284
Lal1g0286 361 CDD ENDO3c 148 318 IPR003265 GO:0006284
Lal1g0286 361 SUPERFAMILY DNA-glycosylase 119 345 IPR011257 GO:0003824|GO:0006281
Lal1g0286 361 Pfam Helix-hairpin-helix motif 226 253 IPR000445 GO:0003677
Lal1g0286 361 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 55 353 - -
Lal1g0286 361 ProSitePatterns Endonuclease III family signature. 229 258 IPR004036 -
Lal1g0286 361 Gene3D - 256 344 IPR023170 -
Lal1g0286 361 ProSitePatterns Endonuclease III iron-sulfur binding region signature. 322 338 IPR004035 -
Lal1g0286 361 Hamap Endonuclease III-like protein 1 [NTHL1]. 107 344 IPR030841 GO:0003906|GO:0005634|GO:0006281|GO:0006285|GO:0019104
Lal1g0286 361 SMART ccc3 321 341 IPR003651 GO:0051539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0286 K10773 - gmx:100818398 497.664