Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0283 ATGGGGGTTATGACAAGGAAGGTTGTGACACCAGTTTGGGATAATTTATGCTGCATTTGTCCTTCTTTGCAACCAAGTTCAAGAAAACCTGTCAAACGTTATAACAAGTTGATTTCTGATATTTTCCCACGTAATCAGGAGGCTGATTTTAATGATAGAAAAATAGGGAAGCTATGTGATTATGCTTCTAAGAATCCACTGCGAGTTCCCAAGATTACTGTTAAATTGGAGCAAAGATGTTACAAGGATTTGCGTTATGGAATATTTGGTTCTGTGAATGTTGTCATGTACATATACAAGAAATTCTTATCATCCTGTAAGGAGCAGATGCCACTATTTGCCAGTAGTTTATTAGGGATCATTCAGACTCTTTTTGAACAAACTCGAGCAGATGAAATCAGGATCTTAGGCTGCAGCACACTTTCTGATTTTATTAATTGTCAGACAGATGGTACATACATGTTCAACTTGGAGGGTTTTATCCCTAAGCTATGTCAATTGGCTCAAGAAGTGGGTGAAGATGAACGTGCTCTGCGTCTCCGTTCAGCTGGACTACAAGCTCTATCGTATATGGTACGTTTCATGGGTGAGCACTCACATCTTTCCATGTATATCAATGAAATTATATCAGTGACTTTGGAGAATTTCACGAATATCCGACCTAACTACAACACTGTGAAGGAAGATAAAATGAATTCCGAGTCCCTGGACCTGTTAGTAGAGGGATTTCCTAAAGAAGAGGACTGCCCTCATTCTTTACCAGATATCAATAAGAAGGATCCTTTTTTGCTGAAAGTTGTGACAGGAACTGAGATGGACTCCATGTTGGATGCTGCTAAAGATCCTACGTATTGGTCAAAGGTTTGCTTGTATAATATGGTCAATTTGCCAAGGGGAGCTATAACTCTTCGGCGTGTCCTTGAACCTCTTTTTCATAATTTTGATACTGAAAATCAATGGTCTTTGGAAAAAGGAGTTGCATGTCGTGTTTTGACTTATGCACAATCTCTTTTAGTAGAATCAGGAGATAACTCCCATCTTATGCTGTCCATTTTGGTCAAGCACCTGGATCATAAGAGTGTTGTCAAACAGCCTATCCTTCAGATTAATATTATTAACACCACAACACAACTTGCACAAAATATGAAGCAACAGGCTTCAGTTGCATTAGTTGGTGCAATATTTGACCTCATTAACCATTTAAGGAGGTGCCTGAAAAATTCATCTGAAGCTTCCCACATTGGGAGTGATGGGTATAAGTTGAATACCGAACTTCAGTCTGCGTTAGAAGTGTGTATATTACAACTTGCAAACAAGGTTGGGGATGTAGGACCTATTCTTGATTTGATGGCTGTGGTGTTAGAGAATACCTTGACTCCCAACATGACAGCAAGGGCAACAATGTTTGCTGTTTATCAAACTGCAAAATTAATCACCTCCATTCCTAATGCTTTCCCTGATGCCTTGTTTCATCAACTTCTTTTGGGAATGGCTCATCCTGACCAAGAAACGCGAACTGGGGCACATCGTGTCTTCTCTACAGTGCTTATGCCATCTCATTTTTCTTCCGGGTTAGACCAGAAAACAAAGATAGAAGGGAAGGTACCAAATAAAAGCTTCTCCGTTCAGCATGAGAGCATTTTAGGATCAGAACACATGAATGGGAAACCCGTGGAAGAAAAGGCAATAACAGGAGGTGGTGGAAAATATGCAGTTCATCCATATCGTGGTTACACCTTTTCTGGTGCTCTAACTGATGGAAAAAATGAACTAAGTTCTTTTCGGTTAAGTAGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGCGGAAAATGGCCCTGCAAATTTTGAGGCAATAGCTCACACATATAGCATTGCTTTATTGTTTACTCGTTCTAAGACATCAAGTTACAAGGCTTTAGCAAGATGTCTCCAACTGGCATTCTCCCTTAGGAGTATCTCTTTGGACCAAGAAGGAGGTCTACAACCATCTCAGATGAGGTCTCTTTTTACCTTGGCATCGTACATGCTTATATTATGTGCTAGGGCAGGCAATTTCCCTGAGCTAATACCAAAAGTCAAAGCATCTCTTATGGAGAAAATGGTAGATCCTTCTCTTGAATTGGTTGATGACGTCAGGCTGCAGGCTGTTTATTTAGAATCAGAGAAGATAATTTATGGATTTCGGGAAGACGATGCTGCAGCTAGGAAGTCACTTTCAGCAGTAGAGTTGGATGACAACCAGTTGAAAGAGACTGTAATATTGTACTTCCAGACTAAATTTTCAAAATTATCAGAGGATGAGTTGTCAAGCATAAAGGAACAACTTGTACAAGGGTTTTCCCCTGATGATGCATATCCATTGGGACCTCCATTGTTTATGGAGACACCACGACTGTGTTCTCCACTTGCTCAGACTGAGTTCCCAGATTTTGCTGAGGTCGAGTTTCCAGTAGCTTTGATGGATGAAGAAAGTGGGCTTGAATCTAGTGGACGTCAGTCAGAATGCAAATTACCACCATCGGCCACTGTCAATGATCTTGACATTCTAAGTGTTAATCAACTCTTGGAATCGGTTTTGGAAATGGCACGGCAAGTGGCAAGTTTCCCCATTTCCTCAAATCCTGTACCCTATGATCAAATGAAGAACCAGTGCGAGGCACTTGTAACAGGGAAACAACAGAAGTTGTCAGTTCTTCACAGTTTCAAGCACCCGCAGGAGACTAAGGCTATAGTTCTTTCAAGTGCAATAAGAGTTTCTCCTAAGATACAGGAGTATAGAGAAGATGATCTGAAGTTAGTGAGCCAGGAGCAATATCAATTTGGCCTCTATTCTTATGACTGTGGACAGCAACAACATTCTTTGAGACTACCACCTTGCAGCCCCTATGATAAATTCTTGAAAGCAGCTAAATGCTAA 2937 0.4069 MGVMTRKVVTPVWDNLCCICPSLQPSSRKPVKRYNKLISDIFPRNQEADFNDRKIGKLCDYASKNPLRVPKITVKLEQRCYKDLRYGIFGSVNVVMYIYKKFLSSCKEQMPLFASSLLGIIQTLFEQTRADEIRILGCSTLSDFINCQTDGTYMFNLEGFIPKLCQLAQEVGEDERALRLRSAGLQALSYMVRFMGEHSHLSMYINEIISVTLENFTNIRPNYNTVKEDKMNSESLDLLVEGFPKEEDCPHSLPDINKKDPFLLKVVTGTEMDSMLDAAKDPTYWSKVCLYNMVNLPRGAITLRRVLEPLFHNFDTENQWSLEKGVACRVLTYAQSLLVESGDNSHLMLSILVKHLDHKSVVKQPILQINIINTTTQLAQNMKQQASVALVGAIFDLINHLRRCLKNSSEASHIGSDGYKLNTELQSALEVCILQLANKVGDVGPILDLMAVVLENTLTPNMTARATMFAVYQTAKLITSIPNAFPDALFHQLLLGMAHPDQETRTGAHRVFSTVLMPSHFSSGLDQKTKIEGKVPNKSFSVQHESILGSEHMNGKPVEEKAITGGGGKYAVHPYRGYTFSGALTDGKNELSSFRLSSHQVSLLLSSIWVQATSAENGPANFEAIAHTYSIALLFTRSKTSSYKALARCLQLAFSLRSISLDQEGGLQPSQMRSLFTLASYMLILCARAGNFPELIPKVKASLMEKMVDPSLELVDDVRLQAVYLESEKIIYGFREDDAAARKSLSAVELDDNQLKETVILYFQTKFSKLSEDELSSIKEQLVQGFSPDDAYPLGPPLFMETPRLCSPLAQTEFPDFAEVEFPVALMDEESGLESSGRQSECKLPPSATVNDLDILSVNQLLESVLEMARQVASFPISSNPVPYDQMKNQCEALVTGKQQKLSVLHSFKHPQETKAIVLSSAIRVSPKIQEYREDDLKLVSQEQYQFGLYSYDCGQQQHSLRLPPCSPYDKFLKAAKC 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0283 978 SUPERFAMILY ARM repeat 94 516 IPR016024 -
Lal1g0283 978 PANTHER PUTATIVE, EXPRESSED-RELATED 1 978 - -
Lal1g0283 978 PANTHER CYCLIN-LIKE PROTEIN 1 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0283 Lal-Chr1 1672065 1681161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0283 K21842 - gmx:100799047 1391.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1065 10 17651143 17660610 Lal1g0283 1 1672065 1681161 PCT
Lal8g0312 8 2086599 2098110 Lal1g0283 1 1672065 1681161 PCT
Lal1g0283 1 1672065 1681161 Lal10g1065 10 17651143 17660610 PCT
Lal1g0283 1 1672065 1681161 Lal8g0312 8 2086599 2098110 PCT