Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0275 ATGGAAAGAGTGGAAGATTTGGTTGTGAATGAAATTCTGAAAAAGTTAGGAGCTGAAGATATTGGCAGAGTTGCTTGTGTTAGCAAACGCTTCTACTCTTTCTCCTCTGAAGAACCTCTTTGGATCCATCTCTGCTTTCGTGATCTCTCTTTGACTCAACCTCTCGATCATCTCGGAAACCCTCTCCCTTCCTTCAAGGAAACTTATAAAACATGGAGAGAAGCTTTTGCTATGTATCCTTGGCCCCTTGTCTACCGTGTAAAAACATGCTGGGACACAATAAAGACTTGGCTGATCAATAATTTTCCGGAAGCTGAGGCCACACTTTGTAAAGGTGCATCAGAAGCTGAGATTCAAGAGTTGGAGAGAGCTTTAAATGTTAAACTGCCTCTTACTACTAGGATTCTCTATCGCTTTCATAATGGCCAAGAAATTGCAAAAGAAGATATAGAAGATAGTACATTTTACAGTTCTCTAGGCCTAATTGGTGGCTACTCATTTTATAGCCATTTTGTGAATGTGTATCTATTGCCTATAAGTCAGGTAATCCAACAAACTCGGAGAATTACGCGTCACTTAGGCTTTTTCAGGAGATCCAAGTATGTTCTTGTAGCTGCTTCATCCACATACACTGAGAAGTTGTTTTTCCTCAACTGTACAAATGGTCAACTATATGTTGGAACCAAGAACTTTCCTGATAATGGGGAAATGATCCCATGTGTTCCACATGATCTGATTAGTTTAGATCATGAAGTGAACAATGAGCAGCAACAGGATGCCATGCTACTGTGGTTAGAAGAACACGGACGCCGTTTACAACATGGCTTTACCAAACTTATTGAAGAAGGAAATATCAGAAGCATTAATCTTTTCCCAGAACAGCCCCCTCTTTGTTCAATGGCTGTAACGAATGGTGTGCAGTATTGCTTATTTCTCGAGGTTCGTGCTTCTGCTTTATTAATCCCTGAGTTGGCTGATCTTCAAGATGACGTTGAAAAGTATTTATTTGCTTATTCAATCCGCATGTCCCTTGAACCCCAAGGATGTGTCATCAACGGGATGCCCTTCAGCTCTTGCCAGCTCCATTGGAGGCACTGGGTCATCCGTGCCAATGATATTGTAGTATCTGATGTGAATGGAGAAGCTGTTATTGGAATGTACCCTCTATTGTGTCCTGGCTATAAAGAATTTGCTTATCAGAGTTGCACGCCTCTACCAACTTCATCGGGTTCGGTTGAAGGTTCTTTTACATTTGTACCTGGCAGACTGGCAGAGCCAAAAGGAGGTCCTTTCAAAGTGACGGTGGCACGTTTCCCGCTCCAGGTTCCAGACTATGTTTTCTGA 1344 0.4204 MERVEDLVVNEILKKLGAEDIGRVACVSKRFYSFSSEEPLWIHLCFRDLSLTQPLDHLGNPLPSFKETYKTWREAFAMYPWPLVYRVKTCWDTIKTWLINNFPEAEATLCKGASEAEIQELERALNVKLPLTTRILYRFHNGQEIAKEDIEDSTFYSSLGLIGGYSFYSHFVNVYLLPISQVIQQTRRITRHLGFFRRSKYVLVAASSTYTEKLFFLNCTNGQLYVGTKNFPDNGEMIPCVPHDLISLDHEVNNEQQQDAMLLWLEEHGRRLQHGFTKLIEEGNIRSINLFPEQPPLCSMAVTNGVQYCLFLEVRASALLIPELADLQDDVEKYLFAYSIRMSLEPQGCVINGMPFSSCQLHWRHWVIRANDIVVSDVNGEAVIGMYPLLCPGYKEFAYQSCTPLPTSSGSVEGSFTFVPGRLAEPKGGPFKVTVARFPLQVPDYVF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0275 447 PANTHER F-BOX PROTEIN SKIP16 1 447 - -
Lal1g0275 447 Gene3D - 91 282 IPR037883 -
Lal1g0275 447 Gene3D - 3 90 - -
Lal1g0275 447 Gene3D ApaG domain 305 447 IPR036767 -
Lal1g0275 447 ProSiteProfiles ApaG domain profile. 306 447 IPR007474 -
Lal1g0275 447 SUPERFAMILY F-box domain 8 76 IPR036047 GO:0005515
Lal1g0275 447 Pfam SMI1 / KNR4 family (SUKH-1) 112 169 IPR018958 -
Lal1g0275 447 ProSiteProfiles F-box domain profile. 1 44 IPR001810 GO:0005515
Lal1g0275 447 Pfam ApaG domain 328 419 IPR007474 -
Lal1g0275 447 SUPERFAMILY SMI1/KNR4-like 91 145 IPR037883 -
Lal1g0275 447 Pfam F-box domain 8 42 IPR001810 GO:0005515
Lal1g0275 447 SMART fbox_2 4 44 IPR001810 GO:0005515
Lal1g0275 447 SUPERFAMILY ApaG-like 329 447 IPR036767 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0275 K10290 - gmx:100778108 690.649