Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0273 ATGGAAGATCGGTTCACAGAATTGAACCCTAAAACGTGCGTTGTTTTAGGTGGCAGAGGGTTCCTTGGAAGATCCTTGGTTCTCAGATTGTTGAAACTTGGTAACTGGATCGTTCGAGTTGCCGATTCCGCTCACTCCCTCCAACTCGATCACTCCGACTCTGACTCGCTTCTCGCTCAAGCTCTCTCTTCTTCTCGCGCTTCTTACTTCCATCTCGACCTTCGCGATAAGCACCGCATTCTCAAAGTTCTAGAAGGTTCTTCCGTCGTGTTTTATATGGATGTCGATGCTTTGAATGCAAATGACTTCTACAGTTGCTATAAGCTTATAGTTCAAGGTGCAAAGAATGTTATTAGTGCTTGCCGAGAGTGTAGAGTGAAACGCCTCATATACAACAGCTCTGCAGATGTGGTTTTTGATGGTTTGCATGATATACGTTACGGCAATGAATCACTGGCATATCCCTGGAAAATGGACAATGTGTTAAGTGACCTTAAGGCTCAAGCAGAAGCATTGATCCTGAGTGCCAATGACATTGATGGCCTATTGACATGCGCACTTCGTCCTAGTAATGTTTTTGGACCTGGTGACTCAGACTTTATACCATGTTTTCTAAAGTTAGCAAGATATGGTTTTACAAAGTTTATTATAGGGACTTGTGATAATCTTTCTGACTTCACCTTTTGTGAGAATGTTACTCATGCACATATCTGTGCAGAAGAAGCCTTAAATTTTCGAACAGTTACTGTGGCTGGAAAGGCATTTTTTATTACAAATCTTGAACCTATGAATTTCTGGGAATTTCTCTCCCTTTTGTTAGAAGGTCTTGGATATCCAAGACCGTTCATTAAACTCCCTTCCAATTTGGTTCAATACTTCCTGTCAGTATTAAGGTGGTTACATGAAAAGCTGAGACCGAGATACTTCAGTTATCCTTTATTAGTTCATTTTTTTCAGTTAGCTACACACACCAGAACATTCAACTGCACAGCAGCTCAGAAAAATATTGGATACTCACCATTAGTCTCCCTTGAGGAAGGCATCATATTAACCATAGGATCACTCTCTAATTTAGCCAAAGATTCATCTTTTTCAAGTTGCTGCAATTCCACTGAAGAGTCAAAAGCAGATAAGATGCTTGGTGGTGGAAAAGTGGCTAACGTATTGTTGTGGAGAGACGAGAAGACATCCTTTACATATTTCACTGTGCTGGTTTTGTTGTTTTACTGGTTTTTCCTTTCCGGACGTAGTTTTATATCATCTGCTGCTGGGCTTTTGCTGATTACCACTTTACTTCTCTATGGATATTGTCTTCTACCATCTAAGCTATTTAATTTCTCTATACCGAGGATGCCCACGTCTAGTTTTGAGATCTCTAATACCACAATGAAAGGTTTGGTTGCAACTATACTTTATCAGTGGAACAAGGGTTTTCAAATTATAAGAAGACTGGGCAAAGGGAATGATTGGTCTACATTCTTCAAGGTTGCAGTTGTTCTTTACTTTCTCAAGTTAATCCTGTCAGTGTCAAAGTTGTTGACAACTCTTATAGGAATAGGTTTGGTCTTTGCATTCATGGCATTTTTTGTGTACGAGCAATATGAATCAGAGATTGATGGATTGGTGGATGTTCTGTTCACCCAATTGAAGGAGTTGATGACATATTTGATGAGAATTTTACCTGTTTCCAAATCGAGGCATCTGCATTATCATCAGGAATGA 1722 0.3984 MEDRFTELNPKTCVVLGGRGFLGRSLVLRLLKLGNWIVRVADSAHSLQLDHSDSDSLLAQALSSSRASYFHLDLRDKHRILKVLEGSSVVFYMDVDALNANDFYSCYKLIVQGAKNVISACRECRVKRLIYNSSADVVFDGLHDIRYGNESLAYPWKMDNVLSDLKAQAEALILSANDIDGLLTCALRPSNVFGPGDSDFIPCFLKLARYGFTKFIIGTCDNLSDFTFCENVTHAHICAEEALNFRTVTVAGKAFFITNLEPMNFWEFLSLLLEGLGYPRPFIKLPSNLVQYFLSVLRWLHEKLRPRYFSYPLLVHFFQLATHTRTFNCTAAQKNIGYSPLVSLEEGIILTIGSLSNLAKDSSFSSCCNSTEESKADKMLGGGKVANVLLWRDEKTSFTYFTVLVLLFYWFFLSGRSFISSAAGLLLITTLLLYGYCLLPSKLFNFSIPRMPTSSFEISNTTMKGLVATILYQWNKGFQIIRRLGKGNDWSTFFKVAVVLYFLKLILSVSKLLTTLIGIGLVFAFMAFFVYEQYESEIDGLVDVLFTQLKELMTYLMRILPVSKSRHLHYHQE 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0273 573 Pfam Reticulon 385 543 IPR003388 -
Lal1g0273 573 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 286 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lal1g0273 573 Gene3D - 3 358 - -
Lal1g0273 573 ProSiteProfiles Reticulon domain profile. 385 573 IPR003388 -
Lal1g0273 573 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 357 IPR036291 -
Lal1g0273 573 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 10 483 - -
Lal1g0273 573 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0273 Lal-Chr1 1598931 1604460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0273 2 352 Lipid Metabolism Gene Families AT2G33630 30.319 8.55e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0273 K23558 - gmx:100794808 824.698