Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0260 ATGGAAGAGGTATACACTGTGAAGGTGGAAGAAGCAAGACCAGAAACTCATGAGAAACCATCAGCGGGTCCTGTGTATAGATGTATTTATGCTAAAAATGCTCTCTTGGAACTCCCTTCTCATTTTCAATCTCCCTGGGACTTCTTCAGGGACTCTGCTACAAGGTACCCCAGCAACCCAATGCTGGGTTGGCGCCAAAAAACTAAAATCGATTCAAAGGTGGGTCCTTATGAATGGGTCACATATCAGGAGGCTTATGATGCTGCTGTAAGAATGGGTGCAGCCATGAGAAGCTGTGGTGTCAATCCTGGTGACCGTTGTGGCATATATGGATCCAACTGTCCCCAATGGATAATTGCAATGGAGGCTTGTAATAGCTATGCAGTAACATATGTCCCGTTATATGACACTCTTGGTCCTAATGCAGTGGAATTTATCATAAACCATGCTGAAGTTTCGATAGGATTTGTACATGAAAACAAGATTCCTTCTATTTTGAAATGTCTTGATGGATGTTCTTCAAATCTTAAAACTATTGTGAGTTTTGGTAATGTTTCAACCGCACAAAAGAAGGAAGCTGAGGAACTTGGTGCATCCTGCTTTACATGGGGAGAGTTTCTCCAGTTGGGGAATCTGGATTTGGATCTACCGTTGAAAAAGAAGACTGACATCTGCACAATCATGTACACAAGTGGAACAACAGGTGAACCAAAAGGTGTTATTATCAAGAATGAGGCTTTCATGGCTGAAGTGTTGTGTATTGATCAAATACTTTTTTTAACAGACAAAGCGGCAACAGAAGATGATGTCTACTTTTCTTTTCTTCCTCTTGCTCATGTATACGACCAGATAATGGAAACCTATTTCATCTACAAGGGCTCCTCAATTGGATTTTGGCAAGGCGATGTCAGGTTCTTAATGGAGGATATCCAGTCACTAAAACCAACAATATTTTGTGGTGTTCCTAGAGTTTTTGACCGCATTTATGCTGGTATCAATAACAAAATATCATCTGGAGGAACACTGCGGAGTACATTGTTCCAGTATGCATATAACTACAAATTGGGATATTTAGAGAAGGGTCTTCCACAAGACAAAGCAGCACCTCTGTTGGATAAGATTGTGTTTGATAAGATAAAACAAGCATTAGGTGGACGAGTCCGTCTCCTGTTATCAGGGGCTGCTCCTTTGCCTAGGCATGTGGAGGAGTTTTTGAGGGTCACTTTGGGATGTACTTTGTCACAAGGATATGGTCTTACCGAAAGCTGCGGTGGGTCTTTCACTGCAATAGCCAATGTGTTTTCTATGATGGGAACAGTTGGAGTCCCCATGACAACCATTGAGGCCAGGCTTGAATCTGTACCAGAGATGGGATATGATGCACTTTCCAGTGAAGCCCGTGGTGAAATTTGCCTGAGAGGGAATACCTTATTCTCTGGCTACTACAAACGTCAAGATCTTACTGAAGAGGTCCTAGTTGATGGTTGGTTTCATACAGGTGACATTGGAGAATGGCAGCCAAATGGAGCCATGAAAATTATTGATAGAAAAAAGAACATCTTTAAATTATCTCAAGGAGAATATGTTGCCGTGGAGAATATTGAAAACAAATATTTGCAATGTCCTCTTATAGCATCGATTTGGGTCTATGGAAACAGTTTTGAGTCTTTCTTGGTGGCTGTAGTAGTTCCTGAAAGACAGGCCCTTGAAGATTGGGCAGTGAAGCATAATTTGACTGATGATTTTAAATCTTTATGTGAAAATCTGAGGGCAAGAAAATACATTTTGGATGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAGGTTTTGAGCTGCTAAAAGCAGTTCAGCTGGAACCAATTCCCTTCGACATGGAGAGAGATCTTATAACTCCAACATTCAAATTGAAGAGACCACAATTGCTCAAGCACTATAAGGATTGTATTGATCAACTATACAAGGAAGCAAAGGGAGCTATGATGTAG 1989 0.4123 MEEVYTVKVEEARPETHEKPSAGPVYRCIYAKNALLELPSHFQSPWDFFRDSATRYPSNPMLGWRQKTKIDSKVGPYEWVTYQEAYDAAVRMGAAMRSCGVNPGDRCGIYGSNCPQWIIAMEACNSYAVTYVPLYDTLGPNAVEFIINHAEVSIGFVHENKIPSILKCLDGCSSNLKTIVSFGNVSTAQKKEAEELGASCFTWGEFLQLGNLDLDLPLKKKTDICTIMYTSGTTGEPKGVIIKNEAFMAEVLCIDQILFLTDKAATEDDVYFSFLPLAHVYDQIMETYFIYKGSSIGFWQGDVRFLMEDIQSLKPTIFCGVPRVFDRIYAGINNKISSGGTLRSTLFQYAYNYKLGYLEKGLPQDKAAPLLDKIVFDKIKQALGGRVRLLLSGAAPLPRHVEEFLRVTLGCTLSQGYGLTESCGGSFTAIANVFSMMGTVGVPMTTIEARLESVPEMGYDALSSEARGEICLRGNTLFSGYYKRQDLTEEVLVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPERQALEDWAVKHNLTDDFKSLCENLRARKYILDELNSTGQKHQLRGFELLKAVQLEPIPFDMERDLITPTFKLKRPQLLKHYKDCIDQLYKEAKGAMM 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0260 662 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Lal1g0260 662 SUPERFAMILY Acetyl-CoA synthetase-like 35 656 - -
Lal1g0260 662 Pfam AMP-binding enzyme 50 524 IPR000873 -
Lal1g0260 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 658 - -
Lal1g0260 662 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 658 - -
Lal1g0260 662 CDD LC-FACS_euk 75 655 IPR045311 GO:0004467|GO:0006631
Lal1g0260 662 Gene3D - 30 516 IPR042099 -
Lal1g0260 662 Pfam AMP-binding enzyme C-terminal domain 534 585 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0260 Lal-Chr1 1535390 1541994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0260 5 655 Acyl Lipid Metabolism Gene Families AT4G23850 56.288 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0260 K01897 - gmx:100790068 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0260 1 1535390 1541994 Lal1g0260 1 1535390 1541994 ECH