Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0253 ATGAGCACCTTGGAGGTAAGAAGTTTCACTGAAGAGCAAGAAGCACTGGTGGTGAAGTCATGGAATGCAATGAAGAAGAATTCTGGAGAGCTTGGTCTCAAGTTTTTCTTGAAAATATTTGAGATTGCTCCATCAGCACAGAAAATGTTCTCATTCTTGAAAGACTCACAAGTTCCTTTGGAGAAAAACCCAAAGCTCAAAACTCATGCTGTGTCTGTCTTTGTCATGACTTGTGAATCAGCTGTTCAACTAAGGAAGGCTGGTAAGGTTACTGTGAGAGAATCGACCTTGAAAAAGTTAGGTGCTAGCCATTTGAAAAATGGTGTAGTAGATGAGCACTTTGAGGTCACAAAGTTTGCACTTTTGGAGACCATAAAAGAAGCTGTGCCTGAAATATGGTCACCTGCCATGAAGGATGCATGGGGAGAAGCTTATGACCAGCTGGTTGGTGCCATCAAATCTGAAATGAAACCATCTTCTTAG 483 0.4161 MSTLEVRSFTEEQEALVVKSWNAMKKNSGELGLKFFLKIFEIAPSAQKMFSFLKDSQVPLEKNPKLKTHAVSVFVMTCESAVQLRKAGKVTVRESTLKKLGASHLKNGVVDEHFEVTKFALLETIKEAVPEIWSPAMKDAWGEAYDQLVGAIKSEMKPSS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0253 160 CDD class1_nsHb-like 9 157 - -
Lal1g0253 160 PANTHER HEMOGLOBIN 1, GLB1,NSHB1,ATGLB1,HB1 3 159 - -
Lal1g0253 160 Pfam Globin 34 152 IPR000971 GO:0020037
Lal1g0253 160 ProSitePatterns Plant hemoglobins signature. 63 74 IPR019824 GO:0019825|GO:0020037
Lal1g0253 160 SUPERFAMILY Globin-like 6 157 IPR009050 -
Lal1g0253 160 ProSiteProfiles Globin family profile. 9 157 IPR000971 GO:0020037
Lal1g0253 160 PANTHER LEGHEMOGLOBIN-RELATED 3 159 IPR001032 GO:0019825|GO:0020037
Lal1g0253 160 Gene3D Globins 8 155 IPR012292 GO:0019825|GO:0020037
Lal1g0253 160 PRINTS Plant globin signature 10 27 - -
Lal1g0253 160 PRINTS Plant globin signature 35 55 - -
Lal1g0253 160 PRINTS Plant globin signature 63 91 - -
Lal1g0253 160 PRINTS Plant globin signature 128 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0253 Lal-Chr1 1516298 1517552 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0253 - - lang:109363491 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0253 1 1516298 1517552 Lal1g0253 1 1516298 1517552 ECH