Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0239 ATGTCGAAGCTAATCCTCTGTGTGTTCCTAACCTTCACCATTATTCCACTGCTATGCAACTCTTTCTCTTCCGATACACCCTCGGATCGACGCGTTCTCGTTTTGCTCGATGATTTTGCTCTCAAATCCTCTCACTCTCTCTTCTTCAATTCCCTCGTTTCTCGCGGCTTCGATCTCGATTTCAAACTCGCTGATGATCCCAAAATCGCGCTCCAGCGATATGGCCAGTACCTATACGATGCCCTAATTCTCCTTTGTCCAACCACCGAACGATTTGGAGGTTCTATTGATGCTGCTGCTATTTTGGATTTTGTGGATTCCGGTCATGATTTGATAGTTGCTGCTGACAGCAATGCATCTGATTTGATCAGAGAAATTGCCACTGAGAGTGGAGTGGACTTTGATGAGGTGCTTACTGTAAAATTGATTAGCATACTTGTTCATTTTACTTTGGTTTATATTTTGTTTCTTCCATGGATTATTGAGGATCCTGCAGCTTTTGTTGTAGATCATTCTGGTTATGCAGTCTCTGCCTCTGAAGGGGATCATACTTTGATTGCTAGTGATGATTTCATCAAGTCTGATGCTCCAGTACTTTTCCAAGGGATTGGGCATTCACTAAATCCTTCCAATAGTCTGGTCTTGAAAGTTCTCTCTGCATCTCCTTCAGCATATTCTGCTGATCCAAAATCTAAGTTGGCAACTCCTCCATCACTCACTGGATCTACGATCTCCTTGGTTTCAGTTATACAGGCAAGAAATAATGCTCGGATATTGATCTCTGGCTCATTGAGCCTGTTTAGCAACCGATTTTTCAGGTCAAGTGTGCAGAAGGCTGGGAGTCCAATCAAGCATGGCAAGTCGGGTAACGAGCAGTTCTTGACTGAAATCAGCAAATGGGTTTTCCATGAAAGAGGTCACCTCAAGGCGGTGAATGTGCAACACCATAAAATTGGGGAAGCTGAGGAACCAGCCATGTATAGGATCAACGATGATTTGGAATACTCTGTTGAAATTTATGAGTGGTCTGGGACAACTTGGGAACCTTATGTGGCTAATGATGTTCAAGTGCAATTTTACATGATGAGCCCCTATGTCTTGAAGACTTTATCAACCGATGGAAAGGGTCGTTATTTCACATCTTTTAAGGTTCCTGATGTCTACGGGGTTTTCCAATTCAAAGTTGACTACCATAAACTTGGATATACTACCTTATCTTTATCAAAGCAGATTCCCGTCCGTCCCTTCAGACACAATGAATACGAGAGATTCATTCCTGCAGCTTATCCCTATTATGGAGCAGCATTTTCAATGATGGCAGGTTTCTTCATCTTCACTGCTGTTCATCTATACAACAAGTAG 1362 0.4258 MSKLILCVFLTFTIIPLLCNSFSSDTPSDRRVLVLLDDFALKSSHSLFFNSLVSRGFDLDFKLADDPKIALQRYGQYLYDALILLCPTTERFGGSIDAAAILDFVDSGHDLIVAADSNASDLIREIATESGVDFDEVLTVKLISILVHFTLVYILFLPWIIEDPAAFVVDHSGYAVSASEGDHTLIASDDFIKSDAPVLFQGIGHSLNPSNSLVLKVLSASPSAYSADPKSKLATPPSLTGSTISLVSVIQARNNARILISGSLSLFSNRFFRSSVQKAGSPIKHGKSGNEQFLTEISKWVFHERGHLKAVNVQHHKIGEAEEPAMYRINDDLEYSVEIYEWSGTTWEPYVANDVQVQFYMMSPYVLKTLSTDGKGRYFTSFKVPDVYGVFQFKVDYHKLGYTTLSLSKQIPVRPFRHNEYERFIPAAYPYYGAAFSMMAGFFIFTAVHLYNK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0239 453 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 6 453 IPR005013 GO:0005789|GO:0018279
Lal1g0239 453 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 6 453 - -
Lal1g0239 453 Pfam Oligosaccharyltransferase 48 kDa subunit beta 31 142 IPR005013 GO:0005789|GO:0018279
Lal1g0239 453 Pfam Oligosaccharyltransferase 48 kDa subunit beta 165 453 IPR005013 GO:0005789|GO:0018279
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0239 Lal-Chr1 1431628 1436190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0239 K12670 - gmx:100803270 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0239 1 1431628 1436190 Lal1g0239 1 1431628 1436190 ECH
Lal1g0239 1 1431628 1436190 Lal2g0153 2 923030 927510 ECH
Lal1g0239 1 1431628 1436190 Lal2g0153 2 923030 927510 LSH