Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0226 ATGGCAGAAGAAGCAATTCTGGGTTACTTGGAACAGAATGATGAGATTAAGGACTCAGGGGAATTCGCAGAAGAACGTAAGATTGAGCATAATGAGATAGTGAATGTGATAAAGAGTCTTCATGGTTTTAGATATGTGGATGCTGAAGACATTAAGAGAGAGTCATGGGTGTTAACCGATGAAGGGAAGACATATGCGGAAGCAGGATCACCAGAAGTTCAGTTGTTTTTGGCAATACCAGAAGAGGGTATCCCTAAAGATGAACTTCAAAAAAAGGTTGGTCCTTCACTCTTCAAGATTGCTTGTGCCCAAGCTGCTAAAAACAAATGGCTCAATATGGGAAAACAACTTATCTCTAGAAAGGTCCAACATGTTGATGACAAGGTCAAAGACTTGCTTCTTCAAATACAACAAGGACAGGTCATTGGTTCAGATGATATCAAGGCACTCAAAGCACGGAAGCTTATTGTTCCACAGACATGGAAGGGTTACTCGGTGAAAAAGGGTCCCAACTATGCGCCAAAAAGAAAGCAGGTTGTCACTGATTTAACTCGGGATAATTTTCAAAGTGGTGAGTGGAAAGAGTTAGAGTTCAAAGAGTACAATTACAGCGCTAAAGGTCAGCCTCTTGAGGGTGGTCATCTTCATCCGCTGCTGAAGGTACGGTCTCAACTTAAACAGATTTTCCTCTGCATGGGGTTTGAGGAGATGCCAACAAATAATTTCGTGGAGAGTAGCTTCTGGAACTTCGATGCCTTGTTCCAGCCCCAACAACACCCTGCTCGTGATTCACATGACACTTTCTTTTTGGAAACTCCTTCAACGACGAACATACTACCAGAAGATTATGTTCAGAGGGTGAAGCAAGTTCATGAATCTGGTGGTTATGGGTCTAGGGGATATGCATATGACTGGAAAAGAGAGGAAGCAAATAAAAACCTCCTGAGAACCCACACAACTGCTGTTTCCTCCCGGATGCTTTACCAGTTGGCAAAGAAACCTTTTTCTCCAAAGAAATATTTCTCTATAGACCGTGTATTCAGAAATGAAGCTGTTGATCGAACTCATCTTGCTGAGTTCCACCAGATAGAAGGCCTTGTGTGTGACCGAGGACTCACTCTCTGTGACTTAATTGGAGTACTGCATGATTTCTTCTCACGCATGGGCATGACCAAGCTGAAGTTCAAACCAGCATATAACCCTTACACTGAACCTAGCATGGAGATTTTCAGGCATAATATGTTAATCAAGTATTGTATCAGTTATCATGAAGGCTTTAAGAAATGGGTAGAGGTGGGAAACTCTGGCATGTTCAGACCTGAAATGTTGCAGCCAATGGGACTTCCTCAAGATGTCCAAGTTATTGCATGGGGTCTTTCCCTTGAAAGGCCAACGATGATACTATATGGGATAGATAACATCAGGGATCTCTTTGGACACAAGGTGGATCTAGGACTTATGAAGAAAAATCCAATATGCCGTCTTGGAATTGAATAA 1497 0.4228 MAEEAILGYLEQNDEIKDSGEFAEERKIEHNEIVNVIKSLHGFRYVDAEDIKRESWVLTDEGKTYAEAGSPEVQLFLAIPEEGIPKDELQKKVGPSLFKIACAQAAKNKWLNMGKQLISRKVQHVDDKVKDLLLQIQQGQVIGSDDIKALKARKLIVPQTWKGYSVKKGPNYAPKRKQVVTDLTRDNFQSGEWKELEFKEYNYSAKGQPLEGGHLHPLLKVRSQLKQIFLCMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLETPSTTNILPEDYVQRVKQVHESGGYGSRGYAYDWKREEANKNLLRTHTTAVSSRMLYQLAKKPFSPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLCDLIGVLHDFFSRMGMTKLKFKPAYNPYTEPSMEIFRHNMLIKYCISYHEGFKKWVEVGNSGMFRPEMLQPMGLPQDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLMKKNPICRLGIE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0226 498 Gene3D - 71 125 - -
Lal1g0226 498 Gene3D - 7 199 - -
Lal1g0226 498 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 220 491 IPR006195 -
Lal1g0226 498 Pfam tRNA synthetases class II core domain (F) 201 483 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Lal1g0226 498 Gene3D Bira Bifunctional Protein; Domain 2 216 497 IPR045864 -
Lal1g0226 498 CDD PheRS_alpha_core 216 483 - -
Lal1g0226 498 PANTHER PHENYLALANYL-TRNA SYNTHETASE 3 496 - -
Lal1g0226 498 TIGRFAM pheS: phenylalanine--tRNA ligase, alpha subunit 167 488 IPR004529 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Lal1g0226 498 PANTHER PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT 3 496 - -
Lal1g0226 498 Pfam PheRS DNA binding domain 3 70 125 IPR040725 -
Lal1g0226 498 Gene3D - 58 156 - -
Lal1g0226 498 Pfam PheRS DNA binding domain 1 3 56 IPR040724 -
Lal1g0226 498 SUPERFAMILY Class II aaRS and biotin synthetases 201 483 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0226 Lal-Chr1 1344868 1350502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0226 K01889 - gmx:100792325 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0226 1 1344868 1350502 Lal1g0226 1 1344868 1350502 ECH
Lal1g0226 1 1344868 1350502 Lal2g0143 2 862604 869255 LSH