Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0224 ATGAGTTCTGATTCCAACGGTGTTCAAATCCATAACAAACGGAGGCTACCAGATTTCCTCCAAAGTGTGAATTTCAAGTACGTGAAACTTGGCTACCATTACCTCATTACCTATCTCTTTGCCCTTACCTTGATCCCTATCATGTTATTTATCATTATCCATGTTACTCACATGAACCTTGAGGACTTTCATGCCATTTGGCTCCAACTTAAGTACAACCTCGCCATCATCCTTATCTTCTCCATTATACTTGTTTCTGGATTCACTATTTACTTCTTCACCAGACCCAGAGCCATTTACCTCATTGACTTTTCATGTTACCGTCCACCTTCTCATCTCATTGTCCAATCTCACCAGTTCATCGAACATTCTAGACTCACTGGCGACTTCGACGAATCCTCGCTCGAGTTCCAGCGCAAAATTCTAGAACGTTCTGGACTTGGCGAAGAGACCTATGTCCCTGATGCAATGCATCATATCCTACCAACACCTACAATGGCTAAGGCGAGAGAAGAAGCTGAACAAGTCATGTATGGTGCACTTGATAACCTTTTTGCCAACACTAACGTTAATCCCAAAGATATTGGTATCCTTATTGTGAATTGTAGCTTGTTTAACCCGACTCCTTCTCTTTCGGCTATGATTGTGAACAAGTATAAGATGTTGGGTGATATAAGGAGCTATAATCTTGGGGGCATGGGTTGTAGTGCTGGTGTTATAGCGATTGACCTTGCTAAGGATATGCTTCAAGTTTATAGGAAGACCTATGCAGTTATGGTTAGTACTGAGAACATTACTCAGAATTGGTACTTTGGGAATAAGAAGTCTATGTTGATACCTAATTGCTTGTTTCGCCTTGGTGGCGCTGCGGTTTTGCTATCCAACAAAGCCTCTGATAGGAGGAAATCCAAGTATGAGCTTTTTTGTGTTGTGAGGACTCATAAAGGTGCTGATGATAAGGCGTTTAAGTGTGTTTATCAGGAACAAGATGATGCTGGGAAAACCGGTGTTTCATTGTCGAAGGAACTCATGGCTATTGCTGGTGATTCTCTTAAGACTAACATCACAACTTTAGGTCCACTTGTTTTGCCAATAAGTGAACAACTTTTGTTCTTTTCAGATTTGGTTGCTAGGAAGATATTTAATGCCTATAAGAAGCCTTATATACCGGATTTCAAGCTTGCTTTTGACCATTTCTGCATACATGCTGGTGGGAGAGCTGTTATTGATGAGCTTGAGAAGAATCTGCAGCTTGAGCCACAACATATTGAGGCATCTAGGATGACTCTGCACAGGTTTGGAAACACTTCCTCAAGTTCAATTTGGTATGAGTTAGCTTACATTGAAGCAAAGGGGAAGATGAAGAAGGGGAATATGGTGTGGCAGATTGCATTTGGGAGTGGATTTAAGTGTAACAGTGCAGTGTGGAAGGCCCTCAGGAATGTCAAGCCTTCACCAAACAGTCCATGGGAAGATTGCATTGCAAACTATCCTGTCAATATTGTTGCATAG 1512 0.416 MSSDSNGVQIHNKRRLPDFLQSVNFKYVKLGYHYLITYLFALTLIPIMLFIIIHVTHMNLEDFHAIWLQLKYNLAIILIFSIILVSGFTIYFFTRPRAIYLIDFSCYRPPSHLIVQSHQFIEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHHILPTPTMAKAREEAEQVMYGALDNLFANTNVNPKDIGILIVNCSLFNPTPSLSAMIVNKYKMLGDIRSYNLGGMGCSAGVIAIDLAKDMLQVYRKTYAVMVSTENITQNWYFGNKKSMLIPNCLFRLGGAAVLLSNKASDRRKSKYELFCVVRTHKGADDKAFKCVYQEQDDAGKTGVSLSKELMAIAGDSLKTNITTLGPLVLPISEQLLFFSDLVARKIFNAYKKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLEPQHIEASRMTLHRFGNTSSSSIWYELAYIEAKGKMKKGNMVWQIAFGSGFKCNSAVWKALRNVKPSPNSPWEDCIANYPVNIVA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0224 503 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 396 477 IPR013747 -
Lal1g0224 503 CDD CHS_like 84 476 - -
Lal1g0224 503 SUPERFAMILY Thiolase-like 308 477 IPR016039 GO:0016746
Lal1g0224 503 PIRSF Very_long_ch_3-ktacl-CoA_syn 18 503 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal1g0224 503 PANTHER 3-KETOACYL-COA SYNTHASE 4 9 502 - -
Lal1g0224 503 Gene3D - 110 478 IPR016039 GO:0016746
Lal1g0224 503 Pfam FAE1/Type III polyketide synthase-like protein 91 379 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lal1g0224 503 SUPERFAMILY Thiolase-like 87 301 IPR016039 GO:0016746
Lal1g0224 503 PANTHER 3-KETOACYL-COA SYNTHASE 9 502 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0224 Lal-Chr1 1332138 1333649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0224 9 501 Miscellaneous Gene Families AT1G19440 76.673 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0224 K15397 - jre:109019693 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0224 1 1332138 1333649 Lal1g0224 1 1332138 1333649 ECH