Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0219 ATGGAAGGAACTGGAGGTAGCAGTGCCTCAGCTGCTGCACCCGTGAACCAATGGTTGCTGGAATTTTCGAGGCGATTTCAGTATTATCTTGATAAATCAACCCCACACTCTACGTATAGATGGATTGGGACTGTTGTTATTGCCTCAATCTATGTTTTGAGGGTTTTTTATATACAGGGATTTTACATTGTGTCTTATGGTCTTGGAATCTACTTGCTGAACTTGTTGATTGGGTTTCTGTCACCTTTGGTTGATCCTGAGCTGGAGCCTTCTGATGGGCCTACGCTGCCAACTAAAGGTTCTGATGAGTTCAAACCATTCATTCGCCGGCTTCCCGAGTTCAAATTTTGGTATTCTTTCACGAAGGCCTTGTGCATAGCATTTGTGATGACTTTCTTTTCTGTATTTGATGTTCCTGTCTTCTGGCCCATATTACTCTGTTACTGGGTTGTTCTATTTGTCCTTACAATGAGGCGCCAAATTGCACACATGGTCAAATACAGATATATTCCATTCAACCTTGGAAAGCAGAAGTATGGTGGCAAGAGATCTTCTGCTGGTAGCAGTGGCACTCGTGCAGACTGA 585 0.4342 MEGTGGSSASAAAPVNQWLLEFSRRFQYYLDKSTPHSTYRWIGTVVIASIYVLRVFYIQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPSDGPTLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMVKYRYIPFNLGKQKYGGKRSSAGSSGTRAD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0219 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016021
Lal1g0219 194 Pfam Rer1 family 19 180 IPR004932 GO:0016021
Lal1g0219 194 PANTHER PROTEIN RER1A 1 188 - -
Lal1g0219 194 PANTHER PROTEIN RER1 1 188 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0219 Lal-Chr1 1295633 1298574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0219 1 194 Miscellaneous Gene Families AT2G21600 77.949 3.80e-111 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0219 - - gmx:100499765 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0219 1 1295633 1298574 Lal9g0158 9 993195 996151 LSH