Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0199 ATGGCACTAAATCTCACTCTATCTCCTTCTCCCCTTTCAACATTCCCAAACCATCACTTACGTCGTCGTTTCCTTCTACAGAACGCTACTCTTACTCCAAATCTATGTCTCACACCCTCGAAACACCGTTTAGTAACTTCACGCGTAGCAGGAGGACATGAACTCACAACTGAATCTGATAACAATAACCGAATCGACATAGATGAAAACACGGGAAAGGAGAGTGAAAAGAAGGAACTAAGTGAACAAAGTATATGGAATCAAATGAAGGAAATTGTAATGTTTACTGGACCAGCAACTGGGCTTTGGATATGCGGACCGTTAATGAGTCTCATTGATACTGCAGTTATTGGTCAAGGAAGCTCTATTCAACTTGCTGCTTTAGGTCCTGCTACGGTTGTTTGTGATTACATGAGCTACGTTTTCATGTTTCTATCCGTTGCTACTTCCAATATGGTTGCTACTGCCATTGCTAAGCAGGATAGAGAAGAGGTGCAGCATCACATATCTGTCTTGCTTTTTGTTGGGTTAGCATGTGGCATTGTGATGCTTTTGTTCACAAGGTTATATGGTGCAACAATACTCACGGCTTTCGCTGGGGCAAAGAATGTACATGTTGTACCTGCAGCTAATACATATGTTCAGATTCGAGGCTTGGCATGGCCTGCTTTACTTATCGGATGGGTTGCTCAAAGTGCAAGTCTTGGCATGAAAGATTCCTGGGGTCCCTTGAAGGCTTTGGCTGCTGCCAGTGTTATAAATCTAATCGGCGATATATTTCTATGCATCTACTTAGGATATGGTATTGCAGGAGCTGCATGGGCTACCATGGCATCACAAGTTGTTGCTGCTTATATGATGATTCAGAATCTAAACAATAAGGGATATAATGCATATGCCTTCTCCGTTCCTTCAGGGAAGGAATTTTTGACGATACTTGCTCTTGCCGCTCCTGTATTTTTGACGATGATGTCAAAGGTGGCTTTCTACTCACTACTAATATACTTTGCTACATCAATGGGCACGCTTCCAATGGCTGCTCACCAAGTAATGGTTCAAATCTACACTACATGTACAGTATGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGGGTTGATGTATGGAGTAAATCGGAATTTGGCAAAGGCCCGATTGCTTCTAAGGTCTCTTGTAATTATTGGAGGTATTCTTGGATTGTTGTTAGGGATTGTTGGAACATCTGTTCCTTGGCTATTCCCCTACATTTTTACATCTGATCAGATGGTCACCCAAGAGATGCATAGGGTGCTTATTCCATACTTTGTAGCGCTAGCTGTGACACCCCCTACTCTCAGCCTGGAGGGAACATTGCTGGCTGGACGGGAACTAAGATTTATAAGTTTGTCAACGAGTGCATGCTTTTGCCTGGGTGCACTAACATTATTGATCGTTAGTAGTAGATATGGTTTGCAAGGGTGTTGGTTTACCCTCGCTGGATTTCAGTGGGCTCGGTTTTCAATGGCCCTTCTGCGCCTTCTCTCTCCCAATGGCATTTTATACTCTGAAGATTTAGGCCGGTATGAGCTGTAG 1581 0.4339 MALNLTLSPSPLSTFPNHHLRRRFLLQNATLTPNLCLTPSKHRLVTSRVAGGHELTTESDNNNRIDIDENTGKESEKKELSEQSIWNQMKEIVMFTGPATGLWICGPLMSLIDTAVIGQGSSIQLAALGPATVVCDYMSYVFMFLSVATSNMVATAIAKQDREEVQHHISVLLFVGLACGIVMLLFTRLYGATILTAFAGAKNVHVVPAANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINLIGDIFLCIYLGYGIAGAAWATMASQVVAAYMMIQNLNNKGYNAYAFSVPSGKEFLTILALAAPVFLTMMSKVAFYSLLIYFATSMGTLPMAAHQVMVQIYTTCTVWGEPLSQTAQSFMPGLMYGVNRNLAKARLLLRSLVIIGGILGLLLGIVGTSVPWLFPYIFTSDQMVTQEMHRVLIPYFVALAVTPPTLSLEGTLLAGRELRFISLSTSACFCLGALTLLIVSSRYGLQGCWFTLAGFQWARFSMALLRLLSPNGILYSEDLGRYEL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0199 526 MobiDBLite consensus disorder prediction 59 79 - -
Lal1g0199 526 Pfam MatE 106 258 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal1g0199 526 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 27 519 IPR044644 -
Lal1g0199 526 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 27 519 - -
Lal1g0199 526 CDD MATE_DinF_like 88 511 IPR044644 -
Lal1g0199 526 TIGRFAM matE: MATE efflux family protein 100 491 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal1g0199 526 MobiDBLite consensus disorder prediction 51 79 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0199 K03327 - gmx:100778295 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0199 1 1179710 1184729 Lal1g0199 1 1179710 1184729 ECH