Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0146 ATGTCATCAGATGATAAGCCAGCGGAAACAGTAATAGTTGGGAACTATGTGGAAATGGAAGCTGAAGAAGGGAAGCCTAAGGATATAAAAACAAGGTTATCAAGCTTCTTATGGCATGGTGGTTCTGCTTATGATGCTTGGTTTAGTTGTGCCTCCAACCAGGTGGCACAAGTTCTGCTTACGTTGCCATACTCATTCTCCCAGCTAGGAATGGTTTCTGGCATACTTTTCCAACTCTTCTATGGTTTACTTGGTAGCTGGACTGCTTACCTCATTAGCATACTCTATGTTGAATACAGAACAAGGAAAGAGAGGGAAAAAGTTAATTTCAGAGACCATATCATTCAGTGGTTTGAGGTTCTTGATGGACTACTTGGGAAGCACTGGAGAAACGTGGGGTTGGCTTTTAACTGCACATTTCTTCTGTTTGGATCTGTTATCCAACTCATAGCTTGTGCAAGCAACATATATTACATAAATGACCATCTGGACAAGAGGACTTGGACTTATATCTTTGGAGCATGTTGTGCCACCACTGTCTTTATCCCTTCCTTTCACAACTACAGAATCTGGTCCTTTGTGGGCCTTGTCATGACTACTTACACTGCTTGGTACCTTACCGTTGCCTCTCTCCTCCACGGCCAGGTGGAGGGAGTGAAGCATTCGGGTCCAGCCAAGTTGGTTCTATATTTTACAGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCTGTTACTGTGGAGATAATGCACGCAATGTGGAAGCCACAGAAGTTCAAGGCCATATACTTGCTTGCAACCCTATATGTGCTGACACTGACACTTCCATCAGCAGTAGCAGTGTATTGGGCATTTGGAGATATGCTTCTAAATCACTCCAACGCCTTTGCTCTCTTCCCTCAATCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATCCACCAGTTTATTACATTTGGGTTTGCATGCACACCATTATACTTTGTATGGGAGAAAGCAATAGGAATGCATGAGTGCAAGAGCCTGTGCAAGCGTGCATTGGTGAGATTACCAGTGGTGATACCAATATGGTTCTTGGCTATCATATTCCCATTCTTTGGACCCATTAACTCAACCGTTGGATCTCTACTTGTCAGTTTCACTGTTTACATCATCCCTGCCCTTGCTCACATCTTCACCTTCAAATCTGCATCAGCCCGCCAGAATGCAGTGGAACAACCTCCCAAATTTGTTGGAAGATGGGTGGGATCGTTTATTATCAACATATTTATTGTGGTTTGGGTCCTTATAGTAGGGTTTGGATTTGGTGGGTGGGCCAGCATGGTTAACTTCATACACCAAATTGACACATTTGGACTCTTCACAAAGTGTTACCAGTGTCCCTCACCTATACTGGCCCCACAAATGCTCAACGCCACCGCGCCGTCCCCACACCACCACCCTCATGGCCACTGA 1461 0.4497 MSSDDKPAETVIVGNYVEMEAEEGKPKDIKTRLSSFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRDHIIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFVGLVMTTYTAWYLTVASLLHGQVEGVKHSGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAVAVYWAFGDMLLNHSNAFALFPQSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSASARQNAVEQPPKFVGRWVGSFIINIFIVVWVLIVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPSPILAPQMLNATAPSPHHHPHGH 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0146 486 Pfam Transmembrane amino acid transporter protein 39 432 IPR013057 -
Lal1g0146 486 PANTHER OS05G0424000 PROTEIN-RELATED 3 469 - -
Lal1g0146 486 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0146 Lal-Chr1 943911 951274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0146 1 462 Organic Solute Cotransporters AT2G21050 88.095 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0146 K13946 - gmx:100812002 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0146 1 943911 951274 Lal1g0146 1 943911 951274 ECH
Lal1g0146 1 943911 951274 Lal2g0089 2 552742 556265 LSH