Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0129 ATGTCAGATCTTGAGGCTCCATTGCGCCCTAAGAGGAAGAAGATTTGGGTGGACTATTTTGTGAACTTTCGATGGATAATTGTTATCTTTGTGGTCCTTCCCATTTCCTTCACCCTTTACTTTCTGACATACCTCGGGGATGTAAGGTCTGAGTGGAAGTCCTATAAAACGCGCCAAAAGGAACATGATGAGAATGTGAAGAAGGTTATCAAACGTCTCAAACAGAGGAATCCCTCAAAAGATGGTCTCGTCTGCACAGCTCGTAAGCCATGGATCGCGGTTGGGATGAGAAATGTTGACTATAAGCGTGCTCGCCATTTCGAAGTTGATTTATCTGCATTCAGGAATGTACTTGAGATCGACAAAGAGAGAATGATTGCAAGATGTGAACCCCTAGTCAACATGGGGCAGATCACCAGGGTGACTGTCCCAATGAATCTAGCACTTGCTGTGGTTGCAGAGCTTGATGATCTTACTGTTGGTGGCCTTATTAACGGTTACGGGATAGAAGGAAGCTCTCACAAATATGGCTTGTTCTCTGATACTGTTGTGGCTTATGAAATTATTTTGGCAGATGGTTCTCTTGTTAGAGCTACCAGGGACAATGAGTACTCTGATCTATTTCATGCCATTCCATGGTCTCAGGGAACACTTGGGCTTCTTGTTGCTGCTGAGATCAAGCTTATACCCATTAAGGAGTATATGAAGGTGACTTATGAACCTGTTGTTGGTAACCTGAAAGAACTTGCACAGGGGTATATTGACTCTTTTGCTCCAAGAGATGGAGACCAGGATAATGATGAGAAGGTTCCAGACTTTGTAGAAACTATGATTTATAATCCAACAGAAGCTGTGTGCATGACTGGGAGATATGCTTCAAAAGAAGAGGCTAAGAAGAAGGGGAATAAGATCAACAGCGTAGGATGGTGGTTTAAAACCTGGTTCTATCAGCATGCGCAGACGGCACTGAAGAAAGGAAAGTTTGTAGAATACATCCCTACAAGAGAATATTATCACAGACACACAAGGTGTCTGTACTGGGAGGGAAAGCTTATTCTCCCATTTGGTGATCAATGTTGGTTTAGGTTTCTGTTTGGCTGGTTGATGCCACCCAAGGTTTCTCTGCTCAAGGCAACTCAAGGTGAGGCTATTAGAAACTATTACCATGAAATGCATGTCATCCAGGACATGCTTGTTCCTCTGTACAAGGTCGGAGATGCATTAGAATGGGTTCACCGCGAGATGGAGGTATATCCCATTTGGCTTTGCCCTCACAAACTATTCAAGCTGCCTGTCAAACCTATGATTTACCCAGAGCCAGGCTTCGAACTACAGCGCAGGCAGGGAGACACACAAACTGCTCAAATGTACACAGATGTCGGAGTTTACTATGCACCAGGTCCTGTTCTGAGGGGTGAGGTATTTGACGGTGCAGGAGCAGTGCAGAAATTGGAGAGCTGGATGATCGAGAATCATGGTTTTCAGCCACAGTATGCTGTTTCTGAGCTGTCTGAGAAGAATTTCTGGAGGATGTTTGATGCTGGTCTGTATGAACAATGCAGGAAGAAGTATGGAGCCGTTGGAACCTTTATGAGTGTGTACTACAAATCAAAGAAGGGCAGGAAAACTGAGAAGGAGGTGCAGGAAGCTGAGCAAGCACACCTTGAAACTGCTTATGCAGAAGTTGATCAACCAGTAGACTGA 1704 0.4448 MSDLEAPLRPKRKKIWVDYFVNFRWIIVIFVVLPISFTLYFLTYLGDVRSEWKSYKTRQKEHDENVKKVIKRLKQRNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNVLEIDKERMIARCEPLVNMGQITRVTVPMNLALAVVAELDDLTVGGLINGYGIEGSSHKYGLFSDTVVAYEIILADGSLVRATRDNEYSDLFHAIPWSQGTLGLLVAAEIKLIPIKEYMKVTYEPVVGNLKELAQGYIDSFAPRDGDQDNDEKVPDFVETMIYNPTEAVCMTGRYASKEEAKKKGNKINSVGWWFKTWFYQHAQTALKKGKFVEYIPTREYYHRHTRCLYWEGKLILPFGDQCWFRFLFGWLMPPKVSLLKATQGEAIRNYYHEMHVIQDMLVPLYKVGDALEWVHREMEVYPIWLCPHKLFKLPVKPMIYPEPGFELQRRQGDTQTAQMYTDVGVYYAPGPVLRGEVFDGAGAVQKLESWMIENHGFQPQYAVSELSEKNFWRMFDAGLYEQCRKKYGAVGTFMSVYYKSKKGRKTEKEVQEAEQAHLETAYAEVDQPVD 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0129 567 Gene3D - 110 231 IPR016169 -
Lal1g0129 567 Pfam FAD binding domain 109 198 IPR006094 GO:0050660
Lal1g0129 567 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, BULB-TYPE LECTIN DOMAIN, FAD-BINDING, TYPE 2-RELATED 1 564 - -
Lal1g0129 567 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 231 IPR016166 GO:0071949
Lal1g0129 567 PANTHER 24-DEHYDROCHOLESTEROL REDUCTASE 1 564 IPR040165 -
Lal1g0129 567 SUPERFAMILY FAD-binding/transporter-associated domain-like 106 231 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0129 Lal-Chr1 857470 860703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0129 K09828 - gmx:100814521 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0129 1 857470 860703 Lal2g0079 2 476249 479097 LSH