Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal1g0127 | ATGGCTTCTTCAGAAACACCTTCTCCTTCTACACCTAATACTTCTGCTCCTACAGCTCCATTCTCTTACAACAACAACAACAACATGCCTCAAAATGTTATCAACACTTCTCACCACTCTTCTACATACTCGGTTGTTCAGCATCCACTTCATGCTCCTTCGTTTTCATTCAATATTCCTCAAACTGGTCACGCCTTTTCTAGCAATCACCGTCCACAATCTAACATGAACATGTCAGATTCTGTTGCGCAGGATGTTAGTAAAGTTTCATCTAGTATTCCAAATTCTGTCCCCCCTCATTCATCTAATCCTACAATGCGTCCAGCTTATGACCCTAACTATCGGCCACCTACTTCATGGACGCCATCTTTCCCTATGCATCATGTAATCCCTGGAACTCCAGGAAACCCTGCTCCCCCTGGATTAATACCCGCTTCGGTAATATCCTCCAATGTATCTGCTCCATCCACAAGCTCAGATTCTTCCTCAGCTGCGGTTCCAAGACAGAATATGCCAAGTGCAGCCATTGCATCAGACCCTACTCTCCAACAGAAGGGCACACCCTATCCATCCATACCAGTCATGGCCGCTTCCCCTCAGGGACTTTGGTTACCACCTCCACAGATCAGTGGTGTACTTAGGCCACCTTTTCTTCCATATCCTGCTGCTTTTCCTGGCCCCTTTCCATTTCCAGCACGTGGTGTTACTCTCCCTGCCGTTCCAGTACCGGATTCTCAACCTCCTGGTGTTACTCCAATGAGTGCTACTGGCGTCACTTCTGCATCTCCTGCTTCAAGTCATCAGTTGAGGGGAACAACTGGTTTTCAGACAGAAGTAATTCCAGGGCATGCTGATTACAAGAAAATATTGAATGTGACACAGAATGAGGATCCTGCTAATGATCAATTAGATGCCTGGACAGCCCACAAGACCGAAACAGGAATTGTATACTATTATAATGCCTCAACAGGAGAATCAACTTATGATAAACCTGCTGGCTTTAAAGGGGAGCCTCACCAAGTTGCTGTACAGCCGACTCCGGTTTCAATGGTGAACTTGCCTGGTACTGATTGGGTATTGGTCTCCACTAGTGATGGGAAAAAATATTACTACAACAATCGAACCAAGACAAGTTGCTGGCAAATCCCAAATGAGGTAGCTGAATTGAAAAAGAAACAAGATGGTGATGTTACAAAAGATCATTTAATGTCAGTTCCAAATACTAATGTATTGTCTGATAAAGGGCCTGGAATGGTTACTCTGAATGCTCCTGCTATTAATACTGGTGGTCGTGATGCTGCAGTTCTTAAACCCTCTAGTATGCAGAGCTCGTCGTCAGCACTAGACTTGATCAAGAAGAAGTTGCAGGACTCAGGAACACCTGTTGCTTCCTCTTCCATTCCTAATTCATCTGTAGGATCTGAATCAAATGGTTCAAAAGCAACCGAGTCTACAGCTAAAGGCCTTCAAATTGATAATAACAAAGATAAGCAAAAAGATACTAATGGTGATGCTAATGTCTCTGACACATCCTCAGATTCAGAAGATGAAGATAGTGGGCCTTCAAAGGAGGAGTGCATACTTCAGTTTAAGAAAATGCTTAAGGAGCGTGGAGTGGCACCATTCTCAAAGTGGGACAAAGAACTACCAAAGATAGTATTTGATCCACGTTTTAAGGCTATACCAAGTTATTCTGCTAGGAGGTCCTTGTTTGAGCATTACGTTAAAACCCGTGCAGAAGAAGAACGCAAAGAAAAACGTGCTGCACAAAAGGCTGCAGTTGAGGGATTTAAGAAGTTACTGGATGAAGCCTCGGAGGATATTAATCACAACACTGATTATCATATTTTCCGTGAGAAATGGGGAGATGATCCACGGTTTAAGGCATTGGACCGCAAGGAACGGGAGCACTTATTGAGTGAAAGAGTGCTTCCTTTGAAGAAAGCTGCTGAAGAAAAGGCCCAAGCAATGCGCGAAGCTGCTACTTCAAGTTTTAAGTCATTGATTAAAGAGAGAGGAGATATAACTTTTAACTCCCGTTGGTCCAGGGTTAAAGAAAGTTTAAGGGATGACCCAAGATATAAATCTGTGAGGCATGAGGACAGGGAGATTTTGTTCAATGAGTATATATCTGAATTAAAAGCTGCTGAACATGCAGCAGAACGAGAAACCAGAGCCAAAAGAGAGGAGCAGGAGAAGCTGAGAGAGAGAGAGCGGGAGCTGCGCAAAAGGAAGGAAAGAGAAGAACATGAAATGGAAAGAGTGCGGCTAAAAATTCGAAGAAAGGAGGCAGTGGCTTCTTTTCAAGCTTTACTTGTGGAAACGATCAAAGACCCTCTGGCATCATGGACAGAATCAAAGTCTAAATTAGAAAAGGATCCTCAAGGACGTGCTACCAATCCTGAACTTGGTCCAGCTGACATGGAAAAGCTCTTTCGAGATCATATAAAGATGCTTCAGGAACGCCGTGTGAACGATTTTAGAGCACTATTAGCTGAAGTGCTGACTGTTGAAGCTGCATCCAGGGAGAGTGAGGATGGGAAAACAGTCCTTAATTCCTGGTCTACTGCTAAACGTGTTTTAAAATCTGATCCAAGGTATAATAAGGTTCCAAGAGAAGAAAGGGAAACCTTGTGGCACCGGTATGCAGAGGATGTGCTGCGGCGGCAGAAGTCATCTCATGATCCAAGGGAAGAAAAACATACTGATTCTAAAGGTAGAGATACTAAAGCTAGAAACCCTCATGAATCTGTATAA | 2757 | 0.4367 | MASSETPSPSTPNTSAPTAPFSYNNNNNMPQNVINTSHHSSTYSVVQHPLHAPSFSFNIPQTGHAFSSNHRPQSNMNMSDSVAQDVSKVSSSIPNSVPPHSSNPTMRPAYDPNYRPPTSWTPSFPMHHVIPGTPGNPAPPGLIPASVISSNVSAPSTSSDSSSAAVPRQNMPSAAIASDPTLQQKGTPYPSIPVMAASPQGLWLPPPQISGVLRPPFLPYPAAFPGPFPFPARGVTLPAVPVPDSQPPGVTPMSATGVTSASPASSHQLRGTTGFQTEVIPGHADYKKILNVTQNEDPANDQLDAWTAHKTETGIVYYYNASTGESTYDKPAGFKGEPHQVAVQPTPVSMVNLPGTDWVLVSTSDGKKYYYNNRTKTSCWQIPNEVAELKKKQDGDVTKDHLMSVPNTNVLSDKGPGMVTLNAPAINTGGRDAAVLKPSSMQSSSSALDLIKKKLQDSGTPVASSSIPNSSVGSESNGSKATESTAKGLQIDNNKDKQKDTNGDANVSDTSSDSEDEDSGPSKEECILQFKKMLKERGVAPFSKWDKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAVEGFKKLLDEASEDINHNTDYHIFREKWGDDPRFKALDRKEREHLLSERVLPLKKAAEEKAQAMREAATSSFKSLIKERGDITFNSRWSRVKESLRDDPRYKSVRHEDREILFNEYISELKAAEHAAERETRAKREEQEKLRERERELRKRKEREEHEMERVRLKIRRKEAVASFQALLVETIKDPLASWTESKSKLEKDPQGRATNPELGPADMEKLFRDHIKMLQERRVNDFRALLAEVLTVEAASRESEDGKTVLNSWSTAKRVLKSDPRYNKVPREERETLWHRYAEDVLRRQKSSHDPREEKHTDSKGRDTKARNPHESV | 918 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 63 | 108 | - | - | |
| Lal1g0127 | 918 | SUPERFAMILY | WW domain | 357 | 389 | IPR036020 | GO:0005515 | |
| Lal1g0127 | 918 | SUPERFAMILY | FF domain | 651 | 717 | IPR036517 | - | |
| Lal1g0127 | 918 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR 1 | 71 | 911 | IPR045148 | GO:0003712|GO:0070063 | |
| Lal1g0127 | 918 | CDD | WW | 356 | 385 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 358 | 385 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | SMART | FF_2 | 523 | 577 | IPR002713 | - | |
| Lal1g0127 | 918 | SMART | FF_2 | 761 | 818 | IPR002713 | - | |
| Lal1g0127 | 918 | SMART | FF_2 | 590 | 645 | IPR002713 | - | |
| Lal1g0127 | 918 | SMART | FF_2 | 658 | 712 | IPR002713 | - | |
| Lal1g0127 | 918 | Gene3D | FF domain | 758 | 818 | IPR036517 | - | |
| Lal1g0127 | 918 | Gene3D | FF domain | 819 | 885 | IPR036517 | - | |
| Lal1g0127 | 918 | Gene3D | FF domain | 508 | 580 | IPR036517 | - | |
| Lal1g0127 | 918 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 300 | 333 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | SUPERFAMILY | WW domain | 305 | 336 | IPR036020 | GO:0005515 | |
| Lal1g0127 | 918 | SUPERFAMILY | FF domain | 582 | 651 | IPR036517 | - | |
| Lal1g0127 | 918 | ProSitePatterns | WW/rsp5/WWP domain signature. | 306 | 331 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | ProSiteProfiles | FF domain profile. | 761 | 818 | IPR002713 | - | |
| Lal1g0127 | 918 | ProSiteProfiles | FF domain profile. | 523 | 577 | IPR002713 | - | |
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Lal1g0127 | 918 | Pfam | FF domain | 661 | 709 | IPR002713 | - | |
| Lal1g0127 | 918 | Pfam | FF domain | 593 | 639 | IPR002713 | - | |
| Lal1g0127 | 918 | Pfam | FF domain | 826 | 881 | IPR002713 | - | |
| Lal1g0127 | 918 | Pfam | FF domain | 528 | 574 | IPR002713 | - | |
| Lal1g0127 | 918 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR HOMOLOG | 71 | 911 | - | - | |
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 63 | 112 | - | - | |
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 458 | 523 | - | - | |
| Lal1g0127 | 918 | Coils | Coil | 713 | 765 | - | - | |
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 458 | 489 | - | - | |
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 886 | 918 | - | - | |
| Lal1g0127 | 918 | Pfam | WW domain | 305 | 331 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | Pfam | WW domain | 356 | 383 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | CDD | WW | 306 | 331 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | Gene3D | FF domain | 581 | 648 | IPR036517 | - | |
| Lal1g0127 | 918 | Gene3D | FF domain | 649 | 724 | IPR036517 | - | |
| Lal1g0127 | 918 | SMART | ww_5 | 301 | 333 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | SMART | ww_5 | 353 | 385 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | SUPERFAMILY | FF domain | 819 | 891 | IPR036517 | - | |
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 785 | 805 | - | - | |
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 721 | 747 | - | - | |
| Lal1g0127 | 918 | MobiDBLite | consensus disorder prediction | 150 | 169 | - | - | |
| Lal1g0127 | 918 | Gene3D | - | 301 | 343 | - | - | |
| Lal1g0127 | 918 | SUPERFAMILY | FF domain | 754 | 822 | IPR036517 | - | |
| Lal1g0127 | 918 | Gene3D | - | 344 | 400 | - | - | |
| Lal1g0127 | 918 | SUPERFAMILY | FF domain | 518 | 583 | IPR036517 | - | |
| Lal1g0127 | 918 | ProSitePatterns | WW/rsp5/WWP domain signature. | 358 | 383 | IPR001202 | GO:0005515 | |
| Lal1g0127 | 918 | ProSiteProfiles | FF domain profile. | 658 | 712 | IPR002713 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal1g0127 | K12824 | - | gmx:100815386 | 1257.66 |