Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0111 ATGGCTTCCTTCAATCACTTCTGGTTTCTCTCTTTCGCTCTTCTCCTTCTCGCTTCCCCTCTCCTTCAAGTTGCTAGGTGCCACACAGAGTCAGATGAAACTGTGCAGGCAACTGAAGAAGCAAGTGATATCGGCATTGTTGGTGACGATGCCGAAGATTTTGGTGATGAGAGCTTCCCTACTGCTCCAGGGATCGATACAATCTGTGTATTTCCAAAAAATAGTGCAAGATTGGTAACAGCTGGAGAGGAGACAGAGCTGCTTGTTGGTGTAAAAAATAACGGGGAGTCAAGCTTGAAAGTTATTGCAATTAAGGCTAGTGTTCACCTTGGTTATGATCATCGTCTGCTTGTCCAGAATCTCACCACCCAGGTTTTCAACAATGGTAAAGTTCCAGCCTCAGCACAGGCTACTTTCCCATATTTATTTGCTGTCAGCAAGTTCTTGCAGCCTGGAAATTTTGATCTTGTGGGCACCATTGTGTATGAGATAGATCAGAATCCATACCAGAGTACTTTCTATAATGGCACAATTGAAGTTGTTGAGGCTGGTACTTTCCTCAGCATAGAATCCGTTTTTCTTGTTACACTTGGAATTGCCCTCCTCGCACTCCTAGGGATATGGATTCACGGTCAAATCCAAAACCTATCAAAGAAAACAAAAAGAGCTCCTAAAGTTGAAGTCGGGACTAGGAGTACAGATGCGTCCTTGGACGAGTGGCTCCAGGTCGGGAACTGCATATACTCAGTCTCAGGTAAACAAATCAAAGAAGAAGAAGTAGATAAACAAATGCTTCTTAGTTTAAACTCTGTAATTGCATTCCCTATGAAGATTCTTACACAGCAACAAGAAGCACTTGTGTGCTTTTGGTTGTGTTTGTTTATTGTGATACTAGGTTTTTGTCATGGAGACCATAGTACAACAGTTAAGGTAGTTGGATTTGGAGAATGCACAGACTGCAAAGAGAACAATATTAAGACTAGCCAGGTTTTTTCAGGGCTGCGTGTAAGTATAGAGTGCAAGGCAGAAAATGGACACTTCAAAACAAGAGGTAATGGTGAACTAGATAAGAATGGGAACTTCAAAGTGTCCCTTCCTCATGACATTGTAAAAGATGGTGAAGTGAAAGAAGAATGCTATGCTCAGCTACATAGTGCATCAAATGCACCTTGCCCTGCTCACCATGGCCTAGACCAGTCCAAAATTATCATTCATTCAAAAGATGGTGACAAACACACCCTTGGTACTGTTGGTAAACTCAAATTTGCATCAGTAACATGCAGTTCAGCTTTCTTTTGGCCTTTCTTCAATCATCCTTTCTTGCCTAAGCTTCCCCACCTTCCACATTTCCCTTTCCCTCCTAAAGTCTTCCCACCATTTCCTCCTAAAGTCTTTCCACCATTTCCTCCAAAGATTTTCCATAAGCACCCTCTCTTTCCTCCCCTGCCTATATATGAGAAACCACTTCCTCCACCAGTGCCAGTATATGAGAAACCTCTTCCTCCACCGGTGCCAGTATATGAGAAACCTCTTCCTCCACCAGTGCCGGTATATGAGAAACCTCTTCCTCCACCTGTGCCGGTATATGAGAAGCCTTTTCCTCCACCTGTGCCGGTATATGAAAAGCCTCTTCCTCCACCTGTGCCAATATATCATAAACCACTTCCTCCACCGGTGCCAATATACCATAAACCTCTTCCTCCACCGGTGCCAGTATATCATAAACCACTTCCTCCACCAGTACCAATATATCATAAACCACTTCCTCCACCGGTACCAATATATCATAAACCACTTCCTCCTCCAGTGCCAGTGTATCATAAACCACTTCCTCCTCCAGTGCCAGTGTATCATAAACCACTTCCTCCTCCAATGCCAGTGTATCATAAACCACTTCCTCCACCTATATATCATAAACCTCTTCCTCCACCAGTGCCAGTATATCATAAACCTCTCCCTCCACCTGTACCAATATATCATAAACCACTTCCTCCGCCGGTGCCAATATACGAGAAGCCTCTTCCTCCACCAGTGCCGATATATCATAAACCACTTCCTCCACCGGTGCCAGTGTATCATAATCCTCTCCCTCCACCTGTGACAGTATATCATAAACCTATCCCTCCATCTGTACCAATATATCATAAACCACTTCCTCCACCAGTGCCAATATACGAGAAACCTCTTCCTCCACCAGTACCAATATACGAGAAGCCTCTTCCTCCACCAGTGCCGGTATATGCAAAGCCTCTTCCTCCTCCAATTCCCATATTCAAGAAGCCATGTCCACCAAAGTTTGAGCATCCACTACTACCACCGGTACCAAACTTCAAGAAACCACTTCCCCCTACCATTCCTATTTACAAACCACCAAACTATAAACATCCACTTTTACCTCCAAAGTTTAAGCATCCACTTATACCACATATTCCAATTTACAAACCACCATTTTTCAAACCTTTTCCTCCTTTCCCAAAGTTGCCTCCATTCAAGAAGCTGCCATTTCCACCTCTTCCTAAGTTCCCCCCGAAGAGCTTTTTCCATCACCCCAAATTTGGAAAATGGTCTCCACTGCCTCCATTTTCTCCTCATTCGTAG 2598 0.4392 MASFNHFWFLSFALLLLASPLLQVARCHTESDETVQATEEASDIGIVGDDAEDFGDESFPTAPGIDTICVFPKNSARLVTAGEETELLVGVKNNGESSLKVIAIKASVHLGYDHRLLVQNLTTQVFNNGKVPASAQATFPYLFAVSKFLQPGNFDLVGTIVYEIDQNPYQSTFYNGTIEVVEAGTFLSIESVFLVTLGIALLALLGIWIHGQIQNLSKKTKRAPKVEVGTRSTDASLDEWLQVGNCIYSVSGKQIKEEEVDKQMLLSLNSVIAFPMKILTQQQEALVCFWLCLFIVILGFCHGDHSTTVKVVGFGECTDCKENNIKTSQVFSGLRVSIECKAENGHFKTRGNGELDKNGNFKVSLPHDIVKDGEVKEECYAQLHSASNAPCPAHHGLDQSKIIIHSKDGDKHTLGTVGKLKFASVTCSSAFFWPFFNHPFLPKLPHLPHFPFPPKVFPPFPPKVFPPFPPKIFHKHPLFPPLPIYEKPLPPPVPVYEKPLPPPVPVYEKPLPPPVPVYEKPLPPPVPVYEKPFPPPVPVYEKPLPPPVPIYHKPLPPPVPIYHKPLPPPVPVYHKPLPPPVPIYHKPLPPPVPIYHKPLPPPVPVYHKPLPPPVPVYHKPLPPPMPVYHKPLPPPIYHKPLPPPVPVYHKPLPPPVPIYHKPLPPPVPIYEKPLPPPVPIYHKPLPPPVPVYHNPLPPPVTVYHKPIPPSVPIYHKPLPPPVPIYEKPLPPPVPIYEKPLPPPVPVYAKPLPPPIPIFKKPCPPKFEHPLLPPVPNFKKPLPPTIPIYKPPNYKHPLLPPKFKHPLIPHIPIYKPPFFKPFPPFPKLPPFKKLPFPPLPKFPPKSFFHHPKFGKWSPLPPFSPHS 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0111 865 Pfam Translocon-associated protein (TRAP), alpha subunit 32 241 IPR005595 GO:0005789
Lal1g0111 865 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 5 256 - -
Lal1g0111 865 Pfam Pollen protein Ole e 1 like 311 393 - -
Lal1g0111 865 PANTHER - 5 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0111 Lal-Chr1 739680 747468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0111 K13249 - gmx:100777232 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0111 1 739680 747468 Lal1g0111 1 739680 747468 ECH
Lal1g0111 1 739680 747468 Lal2g0065 2 366954 368944 LSH