Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0105 ATGGGGAGTGTTTCTTCTGAAGATGGCTCTGACCAACACAGTGACCGTTGCGGAAGCTACACACTCAGTGCTGACGTCAGCGAATCTGAGAGTTCTACCAGTTTTTGCGGTGCTCGCCGTTTCGATACTGAAGCTGCCTCCTCCTCCGCCAATCTTTCCCCTCTTCCCGCCGTTGCTGCCAAAGATGTGGTGCTATGGAATCACAAGCCTAAAAAACGTGACCTAGATTTATCACAAGTGGAAATGATGAAGGAGAGGTTCGCGAAGCTGCTTTTAGGGGAAGACATGTCCGGTGGAGGCAAAGGAGTCTGCACTGCGCTTGCAATCTCAAATGCAATAACCAATCTCTCTGCAACCGTGTTTGGTGAGCTATGGAGGTTAGAGCCCCTAGCAGCACAGAAAAAGGCTATGTGGCATAGGGAAATGGAATGGCTCTTATGCGTAAGCGATTCTATTGTGGAGCTTGTGCCAGCTGTGCAGCAGTTCCCTGGTGGTGGAACATATGAAGTCATGGCTATGCGTCCTCGCTCGGATTTGTTTATCAATCTACCAGCTTTGAAGAAGCTTGATGGAATGCTGCTTGGTATGCTTGATGGATTTGAGGATACACAGTTTTGGTATGTTGATAAGGGAATTATATTGGGTGATTCCAAGGATTGTGATGACTACAATGGTAGACCTTCAGTTAGGCAAGAGGAGAAATGGTGGCTTCCCTCAGCTAAGGTACCACCAAATGGCTTGTCTGAGAATGACCGGAAGAGGTTGCAGCAGTGCAGGGATTGCACCAACCAGATATTAAAGGCTGCCATGGCAATTAATAGCTCCGTTCTTGCAGAAATGGAAATTCCTCGTGCTTATATTGGATCCTTGCCCAAGAATGGAAAAGCTTGTCTAGGGGATATAATCTATCGATACATAACTGCTGACCAGTTCTCGCCTGAATGTCTCCTTGATTGCCTGGATCTCTCGTCAGAGCACCACACTTTGGATGTAGCTAATAGAATTGAGGCTGCCGTGCATGTATGGAGGCTGAAGGACAGTAAGAAACATTCAAATTCAGTGAAAGCCAGACGCTCTTGGGGTGGAAAGGTGAAGGGCCTGGTTGCTAACAGTGAAAGGAACCATTTTCTTTCTCAACGAGCAGAGACCCTTCTGCAAAGCTTGAAACACCGGTTTCCAGGGCTCCCTCAAACTGCACTAGATATGGCCAAGATACAATATAATAAGGATGTAGGACAATCTATTCTGGAAAGCTATTCAAGGGTGATGGAGAGCTTGGCCTTTAACATAATAGCCAGGATTGATGATGTCCTTTATGTAGATGACACTGTAAAGCGATGTTCAGCTGCAGAATCTATCTCTCTCTTCAGCAGAGGAGGTTTTGGTGGTATGCCTATTCAGAAGCGAATGTCTCCAAGTCCATTCTCAATTCAACACACTCCATATGCCTCTCCATTCGCAACCCCATCTTTCTGTTCCTCCTCTCCCATTACTGGGAGCCCTTGCAGTCCTCAAATAACACCTACCGTGAAGTGGAATGGTCGAAAGGAGGCAACAGATTCTAAGCCCGGAAAGTTGGTCTCTGCTGATTTTGAGAGGGTATGGTCATTCACAGGAGACCTTAGTTCAAGAAGAGCTTCTGGTAATGCTCCAGAAAGAGACTAA 1665 0.4667 MGSVSSEDGSDQHSDRCGSYTLSADVSESESSTSFCGARRFDTEAASSSANLSPLPAVAAKDVVLWNHKPKKRDLDLSQVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAAQKKAMWHREMEWLLCVSDSIVELVPAVQQFPGGGTYEVMAMRPRSDLFINLPALKKLDGMLLGMLDGFEDTQFWYVDKGIILGDSKDCDDYNGRPSVRQEEKWWLPSAKVPPNGLSENDRKRLQQCRDCTNQILKAAMAINSSVLAEMEIPRAYIGSLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSSEHHTLDVANRIEAAVHVWRLKDSKKHSNSVKARRSWGGKVKGLVANSERNHFLSQRAETLLQSLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIIARIDDVLYVDDTVKRCSAAESISLFSRGGFGGMPIQKRMSPSPFSIQHTPYASPFATPSFCSSSPITGSPCSPQITPTVKWNGRKEATDSKPGKLVSADFERVWSFTGDLSSRRASGNAPERD 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0105 554 ProSiteProfiles PRONE domain profile. 70 451 IPR005512 GO:0005085
Lal1g0105 554 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 2 554 IPR038937 GO:0005085
Lal1g0105 554 Gene3D PRONE domain, subdomain 1 70 311 - -
Lal1g0105 554 Gene3D PRONE domain, subdomain 1 312 451 - -
Lal1g0105 554 MobiDBLite consensus disorder prediction 1 32 - -
Lal1g0105 554 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 79 445 IPR005512 GO:0005085
Lal1g0105 554 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 2 554 - -
Lal1g0105 554 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0105 Lal-Chr1 707265 710421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0105 - - adu:107477244 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0105 1 707265 710421 Lal1g0105 1 707265 710421 ECH
Lal1g0105 1 707265 710421 Lal9g0083 9 540469 544286 LSH