Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0104 ATGAAGAAGCTCCTTCTTAGTTTGTGTTCAATATTATTACTTGTCTTCAGCATTGTTCATGTTGCTGCTGAAGACCCTTATAGATTCTTTGATTGGAACGTTACCTATGGAGACATTTATCCCCTCGGAGTTAAACAACAGGGTATTCTTATTAATGGACAATTTCCTGGACCAGAAATCTATTCTGTTACCAATGACAATTTGATCATTAATGTACACAATAGCCTACCAGAACCGTTTCTTATATCATGGAATGGTGTTCAGCAAAGGAGAAATTCTTATGAAGATGGAGTTTATGGAACTACATGTCCCATCCCTCCTGGGAAGAATTTCACATACAAACTTCAAGTGAAGGATCAAATTGGAAGCTTCTTTTATTTCCCATCTCTTGCTTTCCATAAGGCAGCTGGTGGCTATGGTGCAATCAAAGTCCTTAGTAGGCCTAGGATCCCAGTTCCATTCCCTGATCCAGCTAATGATTATTCCCTTCTAATTGGAGATTGGTACCATATCAATCACACGAAATTGAAGTCTATTCTAGATTTTGGGCATAGACTTCCATTCCCTCAAGGTGTTTTGATCAATGGTCGTGCAAATGGTACATCATTCACAGTTGAACAAGGGAAAACATACAGGCTTAGGATATCAAATGTTGGGCTTCAGAACACACTAAACTTTAGGATAGAAGGGCATGACTTGAAATTGGTGGAAGTTGAGGGAACTCACACTGTACAAACCACTTATTCCTCAATTGATGTTCATGTGGGACAATCTTATTCAGTGTTGATCACAGCTGATCAAGCACCCAAGGATTACTACATTGTTGCTTCCACTCGTTTCACTGACAATGTTATTACAAGTACAGCTTCCCTTCACTATAGTAACTCTCAACAACCTATTTCTGGACCAATTCCTAGTGGTCCAACAACTCAGATTGATTGGTCTATTAAACAAGCTCGTTCAATCAGGACAAACTTGACAGCAAGTGGGCCAAGGCCAAATCCACAAGGATCCTACCACTATGGTCTTGTGAACATAACTAAGACATTCAAGTTAGAGAGCTCAGCAGCACAAGTAAATGGGAAACAAAGATATGCAATCAACAGTGTATCTTTTATTCCATCTGATGACACTCCTCTGAAGCTAGCAGATTACTTCAAGATTGGTGGTGTGTTCCAAGTTGGAAGCATCCCAGATACCCCTTCTAGGAAACCTATGTATCTTGATACCTCAGTCATGAGTGCTGATTTCCGAGCCTTTGTTGAAATTGTGTTTCAAAACCATGAAGACATAGTTCAAAGCTACCACATTGATGGATATTCATTTTGGGTTGTAGGTATGGATGGTGGTGTATGGAGTCCTGAAAGTCGTAATCAGTATAACCTCAGAGATGCAGTTTCAAGGTGTACAACACAGGTATATCCCAAGTCATGGACTACGATTTATGTAGCACTAGACAATGTGGGTATGTGGAATGTGAGAACTGAATTTTGGGCACGACAATATCTAGGACAACAATTTTATCTACGAGTATATTCACCAGTTGAATCTATTAGGGATGAATATCCAATTCCAAATAATGCACTTCTATGTGGCAAAGCTGCTGGAAGAACAACCAGACCACTATGA 1629 0.3972 MKKLLLSLCSILLLVFSIVHVAAEDPYRFFDWNVTYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNFTYKLQVKDQIGSFFYFPSLAFHKAAGGYGAIKVLSRPRIPVPFPDPANDYSLLIGDWYHINHTKLKSILDFGHRLPFPQGVLINGRANGTSFTVEQGKTYRLRISNVGLQNTLNFRIEGHDLKLVEVEGTHTVQTTYSSIDVHVGQSYSVLITADQAPKDYYIVASTRFTDNVITSTASLHYSNSQQPISGPIPSGPTTQIDWSIKQARSIRTNLTASGPRPNPQGSYHYGLVNITKTFKLESSAAQVNGKQRYAINSVSFIPSDDTPLKLADYFKIGGVFQVGSIPDTPSRKPMYLDTSVMSADFRAFVEIVFQNHEDIVQSYHIDGYSFWVVGMDGGVWSPESRNQYNLRDAVSRCTTQVYPKSWTTIYVALDNVGMWNVRTEFWARQYLGQQFYLRVYSPVESIRDEYPIPNNALLCGKAAGRTTRPL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0104 542 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Lal1g0104 542 Gene3D - 158 332 IPR008972 -
Lal1g0104 542 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 12 535 - -
Lal1g0104 542 PANTHER MULTI-COPPER OXIDASE 12 535 IPR045087 -
Lal1g0104 542 Gene3D - 342 538 IPR008972 -
Lal1g0104 542 Gene3D - 27 148 IPR008972 -
Lal1g0104 542 Pfam Multicopper oxidase 160 295 IPR001117 -
Lal1g0104 542 Pfam Multicopper oxidase 379 513 IPR011706 GO:0005507|GO:0016491
Lal1g0104 542 CDD CuRO_3_AAO_like_1 377 496 IPR034275 GO:0005507
Lal1g0104 542 CDD CuRO_1_AAO_like_1 29 144 IPR034273 GO:0005507
Lal1g0104 542 SUPERFAMILY Cupredoxins 21 174 IPR008972 -
Lal1g0104 542 SUPERFAMILY Cupredoxins 154 333 IPR008972 -
Lal1g0104 542 SUPERFAMILY Cupredoxins 343 533 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0104 Lal-Chr1 701637 705620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0104 - - gmx:100818914 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0104 1 701637 705620 Lal1g0104 1 701637 705620 ECH
Lal1g0104 1 701637 705620 Lal2g0059 2 340195 343647 LSH