Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0102 ATGAAATCAGAAGTAGCTTTGCTGCAATACTCAGATGCAAGCTTGAAACCTCCACTCTCCCCTCTCTTCATACACAATGATCCATCATCCAATATTGAAGATCATCCTTCTCTCTCAAATCTCAATATTACTCAGCAGCAGGAGCAGGTTCAACAATTTCTCAAAGATGATTGGCTTCCTATAACTGAGTCCAGAAATGGGAATGCTTACTATGCAGCCTTTCATATTCTCAATTCTAACATTGGATTTCAACTTCTCATGCTCCCTCCTGCCTTCCTTACTCTTGGTTGGGCATGGGCTAGCGTGTGTTTGCTATCAGCATTTGTGTGGCAGCTATATACAATATTTCTGCTTGTTAAACTTCATGAATCTGTTCCTGGAATTCGTCACAGCAGATACCTCTTCCTCGCCATCACTGCCTTTGGAAAAAGGTTAGGGAAGGTGGCAACATTATTCCCAGTGATTTACCTTTCAGGAGGCACCTGTGTGATGCTTATTATCACTGGTGGTGGAACAATGAAGCTTTTGTTCAATACACTCTGTGAGAACAAGTTTAACGCCCACTCACTAAGCGGTGCTCAGTGGTTTTTGGTGTTTACATGTGTGGCCATTCTCATTGCTCAGTTACCTAACCTCAACTCTATGGCTGCTATCTCTTTCATTGGTGCTGTCACCGCCATATCTTATTGCACCCTCTTTTGGACACTTTCTGTTAAGAAGGGTAAGGCCTCTGGTTTATCCTACACTACATCTTTGTCCAAAGATCATTCTGCTGTGGCTAAGATCACTGATATTCTCAATGCCATTGGAACCATTGTGTTAGCTTTCAGAGGTCACAATGTTTTGCTTGAGATACAAGGGACCCTGCCTTCAAATCTCAAAGAAACATCCAAGGAAACAATGCGTAGAGGAGTGACAATTTCATATATACTAATTGCAATGTGCATATTTCCCCTTGCAATTATAGGATTCTGGGCTTATGGAAATCAGATACATGGAGGGTTGTTAACTGCATTCCCACTATTCCATAGGCATCAAATAACTAAATTCTCAATGGGTGCAATCTATGTTTTGATAATAATACACTGTTTGAGTAGCTACCAAGTCTATGCCATGCTTGTTTTTGACAACCTTGAAATAAAATACACTAGCATCAAGAATAAGAGATGCCCAAGATTGATGAGAACATGCTTCCGTGTATTGTTTGGAGGATTGACATTATTTATAGCTGTCACATTCCCATTCTTGCCAAGCCTTTCAACATTGCTTGGAGGAATGACCCTTGTGCCTATCACATATGCATATCCTTGTTTTATGTGGTTAGCCATCAACAAACCTTGTGCAAAGGGTGTTGTATGGTGGTTCAACTTCGCACTCGGTTGTTTAGGATTACTTCTCGCCGCTCTTTTGGTGGTTGCTGCTGTTAGGACTCTAGCTATCACAGGCTTAAAAGCTAACTTCTTCAAACCATAA 1473 0.4114 MKSEVALLQYSDASLKPPLSPLFIHNDPSSNIEDHPSLSNLNITQQQEQVQQFLKDDWLPITESRNGNAYYAAFHILNSNIGFQLLMLPPAFLTLGWAWASVCLLSAFVWQLYTIFLLVKLHESVPGIRHSRYLFLAITAFGKRLGKVATLFPVIYLSGGTCVMLIITGGGTMKLLFNTLCENKFNAHSLSGAQWFLVFTCVAILIAQLPNLNSMAAISFIGAVTAISYCTLFWTLSVKKGKASGLSYTTSLSKDHSAVAKITDILNAIGTIVLAFRGHNVLLEIQGTLPSNLKETSKETMRRGVTISYILIAMCIFPLAIIGFWAYGNQIHGGLLTAFPLFHRHQITKFSMGAIYVLIIIHCLSSYQVYAMLVFDNLEIKYTSIKNKRCPRLMRTCFRVLFGGLTLFIAVTFPFLPSLSTLLGGMTLVPITYAYPCFMWLAINKPCAKGVVWWFNFALGCLGLLLAALLVVAAVRTLAITGLKANFFKP 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0102 490 PANTHER OS05G0424000 PROTEIN-RELATED 52 484 - -
Lal1g0102 490 Pfam Transmembrane amino acid transporter protein 66 474 IPR013057 -
Lal1g0102 490 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 7 52 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0102 Lal-Chr1 693418 700146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0102 41 490 Organic Solute Cotransporters AT1G47670 48.132 4.18e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0102 - - gmx:100793408 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0102 1 693418 700146 Lal1g0102 1 693418 700146 ECH
Lal1g0102 1 693418 700146 Lal2g0055 2 329300 333150 LSH