Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0084 GTAGAGAACTTATGGGGAAAGGAGGAGAAAGAAAAAAGAATGAGCAAGTTGGTGTGTGTGACTGGTGGTTCTGGTTACATAGCTTCATGGATTGTGAAGTTTCTACTTCAACGTGGTTATAGTGTGAGAGCCACTGTTCGTGACCCAACCAATCCCAAAAAGACACAACATTTGGTTAAGCTTGATGGTGCAAAAGAGAGGTTGCAACTTTTTAAGGCAGATCTTCTTCAAGAAGGTTCCTTTGACTCTGCTATACAGGGTTGTGATGCTGTTTTTCATACTGCTTCACCCGTTCCTCCCCCTGCTGCCGTTATCCATAACCCACAGGCTCAAGTAATTGACCCAGCAGTTAAGGGAACTCTTAATGTTCTTAAGTCCTGTGTAAAATCGCCATCTGTGAAACGAGTCATTCTAACATCTTCTACGGCTGCGGCTTTATACAATGGAAGGCCTCTCAGTCCTGAAGTAGAGGTTGATGAGACATGGTTTTCAAATCCAGATTTTTGTATGGAATCAAAGAAGTGGTATGCATTTGCAAAGACATCGGCAGAGGATATTGCCTGGAAATTTGTAAAGGAAAACAGCATTGACATGGTTGTTATTAACCCAACAATGACGGTGGGGCCTCTCTTGCAACCAGAGCTTAACTCAAGTGCTGCTGCAATTTTCAACCTAATAAACGCAGGTTCAGAAACATTTCCAAATACGAGTTTACCATGGATCAATGTGAAAGATGTTGCAGAAGCCCATATTCAGGCATATGAGATTCCTTCAGCTAGTGGAAGATATATTCTGTGTGAGAGAGTCACACACATCTCTGAAGTTGTCAAGATTTTACGTAATCTTTACCCGACTTTACAAATTGCAGACAAGTGTGCAGACAATGAGCCTTTTATGCCAACATATCAGGTTTCCAAAGAAAAGGCGAAAGACTTGGGAATTGAATTTATTCCTTTGGATGTGAGCCTCAAGGAGACGGTGGAAAGCTTGAAAGAGAAAAAAATTGTGAACGACTTTTACAAAGAAGATAAAGAAGGAAAGAAAGAGAGAATGAGCATATGTGAAGGAAAGTTGGTGTGTGTAACAGGTGCTTCTGGTTATATAGCTTCATGGCTAGTCAAGTTTCTTCTTCAACGTGGTTACACAGTTCGGGCCACTGTACGTGACCCATGCAATCTCAAAAAGATAGAGCACTTGGTTAATCTTGATGGTGCAAATGAAAGGTTGCACCTTTTTAAGGCAGATCTGTTGGAAGAAGGTTCCTTTGACTCTGCTATTGAGGGCTGTCATGGTGTCTTTCATACTGCTTGCCCTGTTATTGCCGCTGCCAATGTCCAAGACCCACAGGCTGAATTAATTGATCCAGCTGTGAAGGGAACTCTTAATGTTCTTAAATCCTGTGTAAAATCGCCATCTGTGAAGCGAGTTATTTTAACATCGTCTATGTCTGCTGTTCTACATAATGGAAGGTCTCGAACTCCCGATGTAATCATTGATGAGACATGGTTTTCAAATCTAGACATCTGTAGGGAACTAAAGAGTTGGTATGCATTTGGAAAGACTTTGGCAGAAGAAATTGCAATGAAGTATCTAAAGGAAAACAACATTGACATGGTTGCCATTAACCCATCAATGACAGTGGGGCCTCTCTTGCAACAGGAGGTTAATGCAAGTGCTGCTTTAATTTTCAACCTAATAAATGGTTCAGAAACATTTCCAAATGCCAGTTATCCATGGATCAATGTGAAAGATGTTGCAGATGCTCATATTCAGGCATATGAGATTGGCTCAGCTAGTGGAAGATATATTCTGGCCGAGAGAGTGGCACACTTCTCAGAAGTTGTTAAGATTTTACGCGATATATACCCGACATTACAAATTGCAGACAAGTGTGAAGACGATAAGCCTTTCATGGCAACATATCAGGTTTCCAAAGAAAAGGCAAAGGGATTGGGAATTGAATTTATTCCATTTGATGTGACCATTCAGGAGACTCTGGAAAGCTTCAAAGAAAAGAAATTTGTAAAGCACTTTTAG 2037 0.4089 VENLWGKEEKEKRMSKLVCVTGGSGYIASWIVKFLLQRGYSVRATVRDPTNPKKTQHLVKLDGAKERLQLFKADLLQEGSFDSAIQGCDAVFHTASPVPPPAAVIHNPQAQVIDPAVKGTLNVLKSCVKSPSVKRVILTSSTAAALYNGRPLSPEVEVDETWFSNPDFCMESKKWYAFAKTSAEDIAWKFVKENSIDMVVINPTMTVGPLLQPELNSSAAAIFNLINAGSETFPNTSLPWINVKDVAEAHIQAYEIPSASGRYILCERVTHISEVVKILRNLYPTLQIADKCADNEPFMPTYQVSKEKAKDLGIEFIPLDVSLKETVESLKEKKIVNDFYKEDKEGKKERMSICEGKLVCVTGASGYIASWLVKFLLQRGYTVRATVRDPCNLKKIEHLVNLDGANERLHLFKADLLEEGSFDSAIEGCHGVFHTACPVIAAANVQDPQAELIDPAVKGTLNVLKSCVKSPSVKRVILTSSMSAVLHNGRSRTPDVIIDETWFSNLDICRELKSWYAFGKTLAEEIAMKYLKENNIDMVAINPSMTVGPLLQQEVNASAALIFNLINGSETFPNASYPWINVKDVADAHIQAYEIGSASGRYILAERVAHFSEVVKILRDIYPTLQIADKCEDDKPFMATYQVSKEKAKGLGIEFIPFDVTIQETLESFKEKKFVKHF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0084 678 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 351 670 IPR036291 -
Lal1g0084 678 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 331 IPR036291 -
Lal1g0084 678 Pfam NAD dependent epimerase/dehydratase family 359 595 IPR001509 -
Lal1g0084 678 Pfam NAD dependent epimerase/dehydratase family 18 257 IPR001509 -
Lal1g0084 678 Gene3D - 16 338 - -
Lal1g0084 678 Gene3D - 357 677 - -
Lal1g0084 678 CDD FR_SDR_e 18 313 - -
Lal1g0084 678 CDD FR_SDR_e 359 652 - -
Lal1g0084 678 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 354 675 - -
Lal1g0084 678 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 14 337 - -
Lal1g0084 678 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 337 - -
Lal1g0084 678 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 354 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0084 Lal-Chr1 589205 595305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0084 355 676 Miscellaneous Gene Families AT5G19440 65.528 1.27e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0084 - - aof:109831306 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0084 1 589205 595305 Lal9g0063 9 375591 383934 LSH