Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0077 ATGGCTGCCGATAAACTCCGAGATTTGTCCAAACCTATTGATGTTCCTTTGCTTGATGCTACTGTTTCTGCTTTCTATGGCACTGGATCTAAGCTTGAGAGAAATGCTGCTGACCAGATTTTGCGTGACTTGCAAAACAATCCTCACATGTGGCTTCAAGTCATGCATATTTTACAGAACACTCAAAATATGAATACTAAGTTCTTTGCCTTGCAGGTTCTAGAAGGTGTAATTAAATATAGATGGAACACATTACCTGTTGAGGAACGAGATGGGATGAAAAATTTCATCTCTGATATTATTATACAGCTCTCTACGAACGAGGCCTCGTTTCGATCAGAAAGGTTGTATGTCAACAAACTCAATATCATATTAGTCCAGATTTTGAAGCACGAGTGGCCAGCGAGATGGCGGAGCTTTATTCCTGACCTAGTCTCAGCTGCTAAAACTAGTGAAACAATTTGTGAGAATTGTATGGCTATATTGAAACTTCTGAGTGAGGAGGTTTTTGATTTTTCAAGAGGAGAGATGACTCAGCAGAAGATTAAAGACCTTAAACAATCATTGAACAGTGAATTTCAGCTCATACATGAGTTTTGCTTATATGTGCTATCAGTGTCCCAAAGGATTGAGCTGATACGGGCAACACTGTCCACATTGCATGCCTTCCTGTCATGGATTCCTCTGGGTTATATATTTGAATCACCATTGCTTGAGACGCTCCTTAAGTTTTTCCCAGTTGCAGCATATCGGAATCTGACATTGCAATGTTTAACAGAGGTGGCGTCCCTTCAATTTGGGAATTACTATGATGTGCAGTATGTCAAGATGTTTACTATATTCATCAGTCAATTGCAGGGCATATTGCCACCCACAGCAAGCATACCCGAGGCATATGAACACGGTTCAAGTGAAGAACAAGTGGGTCTTTGTAATGTGCTTATACAAGAAGTTCACATTCGCATCCTCGAGTCAACTCAAGAGAATATATCTGCTTTGCTATTGGGCCTCGAATATCTTATAAACATTTCATTTGTGGATGATACTGAGGTTTTTAAGGTTTGTTTGGATTATTGGAATTCCTTGGTTTTGGAGCTGTTTGAGCCACATGGTAATTTGGACAACCCTGCAGCTACTGCAGCCATGATGGGACTTCAGGTGCCTGCATTCCTCCCTGGTATGGTTGATGGGCATGGTTCACAGCTTCTTCAGCGTCGTCAGCTTTATGCTGGTTCCATGTCAAAGTTGAGAACGCTAATGATCTGTCGTATGGCTAAGCCAGAAGAGGTTATCATAGTTGAAGATGAGAATGGGAATATTGTCCGGGAAACACTGAAGGACAATGATGTTCTTGTTCAGTATAAGATTATGCGGGAGACTTTGATTTATTTGTCACATCTTGACCATGATGATACTGAAAAGCAGATGCTGAGGAAGTTAAGCAAACAACTGAGTGGTGAGGATTGGTCATGGAACAATTTGAACACACTATGCTGGGCAATAGGATCTATATCTGGTTCCATGATGGAAGAACAGGAAAACAGATTTTTGGTTATGGTCATTCGTGACTTATTGAACCTATGTGAAATCACCAAGGGAAAAGATAACAAAGCTGTTATTGCTAGTAATATCATGTATGTTGTTGGGCAGTATCCACGATTCTTAAGAGCTCATTGGAAGTTTCTTAAAACTGTTGTGAATAAGTTGTTTGAGTTTATGCATGAGACACATCCTGGAGTTCAGGATATGGCCTGCGACACATTTCTTAAAATAGTCCAAAAATGCAAGCGTAAATTTGTGATCACCCAGGTTGGTGAAAATGAGCCATTTGTATCTGAACTTCTAACAGGCCTTCCAACCACCATTGTGGATCTTGAACTACATCAGATACACTCATTCTATGAATCCGTAGGTAATATGATTCAAGCGGAATCGGATGTGCAGAAGAGAGATGAGTATCTTCAGCGGTTGATGGTGCTTCCTAATCAGAGTGCCAAATATTATATACCTGTTATCCCCTCAACCCCTTTTCCTCTGCAGAAATGGTTGGAAATTATAGGGCAGGCACATCAAAATGTTGAGTTTTTGAAGGGTCAAGATGCAATCCGGACTGTGCTTAATATATTGCAGACGAATACAAGTGTTGCAACTTCTTTGGGTACATATTTCCTGCCCCAAATCTCATTGATCTTTCTGGACATGTTGAATGTATACAGAATGTACAGTGAGCTTATTTCAAAAAGTATTACAGAAGGAGGACCTTTTGCATCTAGAACTTCTTATGTGAAACTTCTACGTTCGGTCAAGAGGGAAACACTTAAGCTGATTGAGACATTCTTGGATAAGGCTGAAGATCAACCACAAATTGGGAAGCAATTTGTGCCGCCAATGATGGATCCTGTTTTGGGAGATTATGCTAGAAATGTTCCTGATGCGAGGGAATCGGAGGTTTTGTCACTTTTTGCTACAATCATAAACAAATATAAAGCTGCAATGGTTGAAGATGTACCTCGCATATTTGAAGCTGTTTTTCAGTGCACATTAGAGATGATTACGAAGAATTTTGAAGATTACCCAGAGCATCGGCTCAAATTCTTCTCATTAATTCGTGCCATAGCTACTCATTGTTTTCCTGCACTAATCTGCTTATCAAGTCAGCAACTGAAGCTTGTTATGGATTCAATCATATGGGCATTTCGACATACAGAAAGGAATATTGCCGAAACTGGGTTGAACCTGTTGTTGGAGATGCTGAAGAAGTTTCAGGGCTCGGGATTCTGTAATCAGTTTTATAGAACATACTTTTTGACAACAGAGCAAGAGATATTTGCTGTCTTGACAGACACTTTTCATAAGCCGGGGTTCAAATTACATGTCTTGGTGCTCCAGCATTTGTTTTGTCTGCTGGAAACTGGTGCCATAACTGAACCTCTTTGGGATTCTGCTACAAATCCTTATCTATACTCGAGTAATGTGGAGTTTGTACGTGAGTTTACCATAAAACTTTTAAGCACTTCATTTCCCAACATGACAGCCGCAGAGGTTACCCAATTTGTTAATGGGCTCTTCGAATCCATGAAGGACCTCTCTACATTTAAAACTCACATTCGAGACTTTCTTATACAGTCAAAAGAATTTTCAGCTCAGGATAACAAAGATCTATATGCTGAAGAGGCTGCTTCTCAGAAAGAGAGAGAACGACAAAGGATGCTTTCTATTCCAGGGCTTATTGCCCCGAATGAGTTACAAGACGAAATGGACTCATAG 3267 0.4019 MAADKLRDLSKPIDVPLLDATVSAFYGTGSKLERNAADQILRDLQNNPHMWLQVMHILQNTQNMNTKFFALQVLEGVIKYRWNTLPVEERDGMKNFISDIIIQLSTNEASFRSERLYVNKLNIILVQILKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKDLKQSLNSEFQLIHEFCLYVLSVSQRIELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPVAAYRNLTLQCLTEVASLQFGNYYDVQYVKMFTIFISQLQGILPPTASIPEAYEHGSSEEQVGLCNVLIQEVHIRILESTQENISALLLGLEYLINISFVDDTEVFKVCLDYWNSLVLELFEPHGNLDNPAATAAMMGLQVPAFLPGMVDGHGSQLLQRRQLYAGSMSKLRTLMICRMAKPEEVIIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQMLRKLSKQLSGEDWSWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENEPFVSELLTGLPTTIVDLELHQIHSFYESVGNMIQAESDVQKRDEYLQRLMVLPNQSAKYYIPVIPSTPFPLQKWLEIIGQAHQNVEFLKGQDAIRTVLNILQTNTSVATSLGTYFLPQISLIFLDMLNVYRMYSELISKSITEGGPFASRTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKAAMVEDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLIRAIATHCFPALICLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKKFQGSGFCNQFYRTYFLTTEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGAITEPLWDSATNPYLYSSNVEFVREFTIKLLSTSFPNMTAAEVTQFVNGLFESMKDLSTFKTHIRDFLIQSKEFSAQDNKDLYAEEAASQKERERQRMLSIPGLIAPNELQDEMDS 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0077 1088 SMART IBN_N_2 37 103 IPR001494 GO:0006886|GO:0031267
Lal1g0077 1088 SUPERFAMILY ARM repeat 725 1047 IPR016024 -
Lal1g0077 1088 Gene3D - 1 1072 IPR011989 -
Lal1g0077 1088 SMART CRM1_C_2 726 1048 IPR014877 GO:0005049
Lal1g0077 1088 PANTHER EXPORTIN 1/5 315 1086 IPR045065 GO:0005049|GO:0006611
Lal1g0077 1088 PANTHER EXPORTIN 1/5 4 313 IPR045065 GO:0005049|GO:0006611
Lal1g0077 1088 MobiDBLite consensus disorder prediction 1059 1088 - -
Lal1g0077 1088 Pfam CRM1 / Exportin repeat 2 405 472 IPR041235 -
Lal1g0077 1088 SUPERFAMILY ARM repeat 21 1037 IPR016024 -
Lal1g0077 1088 ProSiteProfiles Importin-beta N-terminal domain profile. 37 103 IPR001494 GO:0006886|GO:0031267
Lal1g0077 1088 PANTHER EXPORTIN 1A-RELATED 4 313 - -
Lal1g0077 1088 PANTHER EXPORTIN 1A-RELATED 315 1086 - -
Lal1g0077 1088 Pfam Importin-beta N-terminal domain 37 103 IPR001494 GO:0006886|GO:0031267
Lal1g0077 1088 Pfam CRM1 / Exportin repeat 3 486 535 IPR040485 -
Lal1g0077 1088 Pfam Exportin 1-like protein 115 258 IPR013598 -
Lal1g0077 1088 Pfam CRM1 C terminal 726 1047 IPR014877 GO:0005049
Lal1g0077 1088 Pfam Chromosome region maintenance or exportin repeat 332 367 IPR041123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0077 Lal-Chr1 563020 574902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0077 K14290 - gmx:100813443 1957.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0077 1 563020 574902 Lal1g0077 1 563020 574902 ECH