Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0071 ATGACATCAAAGTCATTCAATCCAAGCAGATCAAATCTGTCACAAGCTTCTGATGCATCTGATAGCCAGAAGCCTCCTTTACCCCCAACTGTAAGATTTGGTCGAAGAACTTCCTCTGGTCGTTACATCAGTTACTCCAGAGATAGCCTTGACAGTGAACTGGAGAATAATGACTTTCTGAATTATACAGTGCATATGCCACAAACCCCTGATAACCAGCCAATGGATCCATCAATCTCGCAGAAAGTTGAGGAGCAATATGTATCGAATTCACTATTCACAGGTGGATTCAACAGTCTTACTAGAGCTCATCTAATGGATAAGGTGATAGAATCTGAAGCAAACCATCCACAGATGGCTGGTGCAAAAGGGTCTTCATGTGAAGTTCCTGGTTGTGATGCTAAGGTGATGAGTGATGAACGAGGTGTGGATCTTCTTCCATGTGAGTGTGATTTTAAGATATGTAGAGACTGCTATATTGACGCGGTGAAAACAGGAGGTGGAATATGCCCAGGGTGCAAAGAGTCATATAAGAACACAGAACTAGATGAAGTAGGTGTAGATAATGGAAGGCACCTTCCACTTCCTCTACCAAGTGGAGTGTCTAAAAGAGATAGGAGTTTGTCTGTGATGAAGCCAACCAAGTCTCTAATGAGAAGCCAAACCGGAGATTTTGATCACAACCGGTGGCTCTTTGAAACAAGGGGTACCTATGGCTATGGCAATGCTATATGGCCAAAGGAAGGGAATTTTGCAAATGGAAAAGGTGATGATGATTATGCTGAGCCAACTGAGTTTATGAACAGACCCTGGAGGCCACTTACACGTAAACTCAAGATACCTGCTGCTATTCTCAGTCCATATCGGCTTATCATTTTCATCCGTATTATTGTCTTGGTACTGTTCTTGTCATGGAGGGTCCAGAACAAAAATGTTGATGCAATCTGGCTGTGGGGCATGTCTGTGGTTTGTGAGATATGGTTTGCTTTTTCATGGCTTTTGGATCAATTGCCTAAGCTATGCCCAGTGAACCGTTCCACTGATCTTACTGTTCTGAAGGAAAAATTTGAAACACCAAGTCCTGACAATCCTACTGGAAAGTCTGATCTTCCAGGCATCGATGTCTTTGTCTCCACTGCTGATCCTGAGAAAGAACCACCTCTTGTCACTGCAAACACTATCCTCTCTATTTTAGCTGCTGATTATCCAGTTGAGAAGCTTTCTTGCTATGTTTCTGATGATGGAGGTGCACTTTTAACCTTTGAGGCAATGGCTGAAGCTGCCAGCTTTGCTAATGTATGGATTCCATTCTGCCGTAAACATGACATAGAACCCAGAAATCCAGAATCATATTTCAGTTTAAAGAGAGATCCTTACAAAGGCAAAGTGAAACCAGATTTTGTTAAGGATCGTAGGCGGGTAAAGCGTGAGTATGATGAGTTCAAAGTCAGGATCAATGGTCTCCCTGAATCTATCCGTCGCCGCTCAGATGCCTTTCATGCAAGAGAAGAAATCAAGGCCATGAAACTTGAGAGAGAAAACAGGGAAGATGAACCTATTGAACCTGTTAAGATTGCAAAAGCAACATGGATGGCTGATGGAACTCATTGGCCGGGAACTTGGTTAAATCCTTCACCTGATCACACTAAAGGTGATCATGCTGGTATAATCCAGGTGATGTTGAAACCTCCGAGTGATGAAACTCTTGTTGGAAGTGGTGATGAAAACAACCTCATTGACACGACTGATGTTGATGTCCGCCTTCCCCTTCTTGTTTATGTTTCTAGAGAGAAGCGCCCAGGCTATGATCACAACAAAAAAGCAGGTGCCATGAACGCCTTGGTTCGAGCCTCGGCTGTGATGTCTAATGGTCCATTTATACTCAATCTTGACTGTGACCACTACATCTATAACTCAAAGGCAATGAGGGAAGGTATGTGTTTTATGATGGATCGCGGAGGTGACCGCATTTGCTATGTCCAATTCCCCCAGAGGTTTGAGGGGATTGATCCCTCAGATAGATATGCTAACCATAACACTGTCTTCTTTGATGTCAACATGAGAGCACTTGATGGACTTCAAGGACCAGTCTATGTGGGAACTGGTTGTCTTTTTAGAAGGGTTGCCCTTTATGGTTTTGATCCGCCTCGCTCTAAAGAACACAATTCAGGTTTCTGTACTTGCTGCTTTGGCCGTTCCAAGAAGAAGAATGCATCAATGGCAAACTCCCATGAAGAGAACCGAGCACTAAGGATGGGTGATTCTGACGACGAAGAAATGAACCTGTCATTCTTCCCTAAGAAGTTTGGGAACTCAACTTTACTCATTGACTCAATACCAGTGGCAGAGTTCCAAGGTAGGCCACTTGCTGATCACCCTGCAGTGAAAAATGGACGCCCGCCTGGTGCTCTCACCACACCGCGCGAGCTTCTCGATGCATCAACTGTGGCTGAGGCCGTCAGTGTCATTTCATGTTGGTATGAGGACAAGACCGAGTGGGGACAACGTGTTGGATGGATCTATGGATCAGTTACTGAGGATGTGGTCACCGGTTATAGAATGCACAATAGAGGATGGAAATCAGTTTACTGTGTGACCAAGCGTGATGCCTTTCGTGGAACTGCTCCTATCAATCTCACTGATAGGTTGCATCAGGTGCTCAGATGGGCTACTGGCTCGGTTGAAATATTCTTCTCTAGAAACAATGCTCTTCTGGCTAGCCCAAGAATGAAATTTCTTCAAAAAATTGCATACCTTAATGTTGGAATTTATCCATTCACTTCCATATTCCTTATTGTCTACTGCTTCCTCCCTGCACTTTCACTCATCTCTGGCCAGTTCATTGTTCAGAACCTCAACGTCACATTCCTTGTTTATCTCTTGACCTTCACGGTGACATTGTGCATGCTTGCAGTGCTTGAAATCAAGTGGTCCGGCATTGAGCTAGAAGAATGGTGGAGAAATGAGCAATTTTGGTTGATTGGAGGGACTAGTGCCCATCTAGCTGCTGTGCTTCAAGGTTTGCTCAAAGTTATAGCAGGCATTGAAATCTCCTTCACCTTGACTTCAAAATCAGTTAGTGACGATGTAGATGATGAATTTGCTGATCTCTATGTTGTGAAATGGACATCCCTTATGATACCACCAATCACAATTATGATGGTTAACTTGATAGCAATAGCGATTGGACTTAGCCGGACTATATACAGTACAATACCGCAATGGAGCCGTCTACTTGGTGGTGTTTTCTTCAGTTTTTGGGTGTTGACTCATCTCTACCCTTTTGCAAAAGGTTTGATGGGAAGAAGGGGAAGGACACCTACCATTGTTTTTGTGTGGTCAGGCCTTATAGCAATCACAATATCACTCTTGTGGGTGGCAATCAATCCCCCTACTGGTAATAACCAAATTGGTGGTTCCTTCCAGTTCCCATGA 3435 0.4384 MTSKSFNPSRSNLSQASDASDSQKPPLPPTVRFGRRTSSGRYISYSRDSLDSELENNDFLNYTVHMPQTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSLTRAHLMDKVIESEANHPQMAGAKGSSCEVPGCDAKVMSDERGVDLLPCECDFKICRDCYIDAVKTGGGICPGCKESYKNTELDEVGVDNGRHLPLPLPSGVSKRDRSLSVMKPTKSLMRSQTGDFDHNRWLFETRGTYGYGNAIWPKEGNFANGKGDDDYAEPTEFMNRPWRPLTRKLKIPAAILSPYRLIIFIRIIVLVLFLSWRVQNKNVDAIWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLTVLKEKFETPSPDNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWIPFCRKHDIEPRNPESYFSLKRDPYKGKVKPDFVKDRRRVKREYDEFKVRINGLPESIRRRSDAFHAREEIKAMKLERENREDEPIEPVKIAKATWMADGTHWPGTWLNPSPDHTKGDHAGIIQVMLKPPSDETLVGSGDENNLIDTTDVDVRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHNSGFCTCCFGRSKKKNASMANSHEENRALRMGDSDDEEMNLSFFPKKFGNSTLLIDSIPVAEFQGRPLADHPAVKNGRPPGALTTPRELLDASTVAEAVSVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQKIAYLNVGIYPFTSIFLIVYCFLPALSLISGQFIVQNLNVTFLVYLLTFTVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSVSDDVDDEFADLYVVKWTSLMIPPITIMMVNLIAIAIGLSRTIYSTIPQWSRLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPTGNNQIGGSFQFP 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0071 1144 MobiDBLite consensus disorder prediction 1 24 - -
Lal1g0071 1144 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 34 1142 - -
Lal1g0071 1144 MobiDBLite consensus disorder prediction 1 35 - -
Lal1g0071 1144 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 575 715 IPR029044 -
Lal1g0071 1144 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 34 1142 - -
Lal1g0071 1144 Pfam Cellulose synthase 373 1135 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal1g0071 1144 SUPERFAMILY Nucleotide-diphospho-sugar transferases 388 714 IPR029044 -
Lal1g0071 1144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 191 IPR013083 -
Lal1g0071 1144 SUPERFAMILY RING/U-box 112 181 - -
Lal1g0071 1144 Pfam RING/Ubox like zinc-binding domain 129 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0071 Lal-Chr1 520616 525350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0071 2 1144 Glycosyltransferase AT3G03050 81.565 0.0 1974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0071 K20924 - gmx:100792604 2117.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0071 1 520616 525350 Lal1g0071 1 520616 525350 ECH