Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0070 ATGACAAAATCGGTGAAAGTGAGCAACATCTCTTCAAGTGCAACTGAGCAAGACTTGAAGGAATTTCTGACCTTTCCTGGAAAAATTGAATATATTGAATTGAAGAGTGATAATAATGGAAGTTCCCAAGTTGCATATGTTACCTTCAGTAATCCGGAGGGAGCTGAGACTGCTGTTCTTCTATCGGGAGCAGTGGTGGCTGGACAGCCTTTAACCATAGCTATGGCCCCGGAATATTCTCTGCCTGCCTCTGTTGCATCTACACTGCCAACTGTAGCAACAGAGACTGGTGAATCTGGTTTGAGAAAGGCAGAGGATGTTGTAACCAGCTTGCTAGCCAAGGGCTTTATTTTGGGTAAAGATGCATTAACCCATGCTAAATCCTTTGATGAAAAGCACCATGTTACTTCCACGGCCACAGCAAAAGTTGTTTCTCTGGACCAAAAGGTAGGTCTCACTGAAAAAATCAGTGCTGGTACAACTTTGGTGAATGAGAAAGTAAAAGAAATGGATGAGAAATTTCAAGTTTCAGAGAAGACTAAGATTGCAATCTCAGCCGCTGAGCAGACGGTAAGTAACGCCGGATCAGCCATCATGAAGAATCGTTATATCTTGACCGGGGCTACATGGGTCACTGGTGCATATAATAAGGTTGCTAAGGCAGCTGAAGAGGTGGGTCAAAAAACTAAGGAGAAGGTTTTAGCACATGATAATAATAATACTAATCAAGGAAAGACAGAAGAAGGGCATGTCCAAACCAACATCACTGAACCTCAACAGACCACCAAAGCTGATCAACCCTCTAAACCTGAATCTCAACAGAACACCAAGCCTGACAACAAGCCTTCCAATCCTGAAACAACTCAAGGTCTTGTCCTTTGA 882 0.4308 MTKSVKVSNISSSATEQDLKEFLTFPGKIEYIELKSDNNGSSQVAYVTFSNPEGAETAVLLSGAVVAGQPLTIAMAPEYSLPASVASTLPTVATETGESGLRKAEDVVTSLLAKGFILGKDALTHAKSFDEKHHVTSTATAKVVSLDQKVGLTEKISAGTTLVNEKVKEMDEKFQVSEKTKIAISAAEQTVSNAGSAIMKNRYILTGATWVTGAYNKVAKAAEEVGQKTKEKVLAHDNNNTNQGKTEEGHVQTNITEPQQTTKADQPSKPESQQNTKPDNKPSNPETTQGLVL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0070 293 PANTHER BINDING PARTNER OF ACD11 1 2 263 - -
Lal1g0070 293 MobiDBLite consensus disorder prediction 235 293 - -
Lal1g0070 293 MobiDBLite consensus disorder prediction 236 293 - -
Lal1g0070 293 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 3 78 IPR000504 GO:0003723
Lal1g0070 293 Gene3D - 1 74 IPR012677 -
Lal1g0070 293 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 2 263 - -
Lal1g0070 293 SMART rrm1_1 4 74 IPR000504 GO:0003723
Lal1g0070 293 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 71 IPR000504 GO:0003723
Lal1g0070 293 SUPERFAMILY RNA-binding domain, RBD 3 78 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0070 Lal-Chr1 516356 518861 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0070 - - gmx:100784398 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0070 1 516356 518861 Lal1g0070 1 516356 518861 ECH