Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0054 ATGGGTTCAGAACATTTGTCTGGGAGAAGTTGCAGAAAACCCATTGGGATTAAGATCATTGAGGACTTAAAAGGAAGCCGCATCTCCTTCAAAACCCACCAAGCCATTGTTCTGATTGTAACTTTTTTAGCTTATGCTAGTTACCATGCCACCAGAAAAACCACAAGTATTGTCAAGAGTGCCCTTGACCCGAAATCACCGGACCTTGGCATGAATTTCGTTCCCTTGAGGCTAACCAATTTCATGGAGGCGAATGGACCAATGAAATTTTCTGGTGCTTTTGGTGGTGGCTGGGCTCCATTTAATGGCTCAGATGGGACATCCCTTCTTGGTCAATTGGATGTTGCTTTCCTTTCAGTATATGCTTTTGGCATGTACTTTTCGGGACATTTGGGTGATAGGTGTAATTTGAGGATTTTTCTAACAGTAGGGATGTTAGGAACTGGTGTGTTCACTTCACTCTTCGGCGTAGGATACTGGGGGAACATTCATAACTTCTATTATTTTTTGGTAGTTCAAATGATTGCTGGGTTATTTCAATCCACAGGATGGCCTTCGGTAGTTGCAGTCGTGGGTAACTGGTTTGGAAAGAGCAAGAGAGGGTTGATCATGGGAGTTTGGAATGCCCACACTTCTGTTGGGAACATTGCAGGTTCCTTGATTGCTTCTGCTATGTTGAGCTATGGATGGGGTTGGTCCTTTGTTCTGCCAGGACTTTTAAGTGCTTTCATTGGTTTGGTGATTTTCCTTATATTGCCGGTCACACCTGAGTCCGTTGGAGTGGATAGAGAGGAAGATGAGTATATTTTTCCCAATAAAAGTGGAGATGAAGAGGTAGAGGAGCCTCTGTTAGCTCCTCCAGTGGTGGACAAAGCTGTTGGGTTTATAGAGGCTTGGAAAATTCCCGGGGTTGCTCCTTTCGCTTTTTGTCTGTTTTTCTCCAAATTGGTTGCATATACATTTCTCTATTGGCTCCCATTCTATGTTAGCCACACAGCAATTGATGGCCAATATCTATCTAGTGAGGCAGCAGGAACTCTGTCCACTTTATTTGACGTTGGAGGTGTGCTGGGAGGAATTTTAGCCGGTCACATTTCCGACCGATTAGGTGCTAGAGCCATCACAGCAGCAAGTTTCATGTACTGTGCAATCCCTGCCCTGTACTTCTATCGAAGTTACGGGCACGTTTCCTTGATTTTAAACGCAGCATTGATGTTCATCACTGGCTTGTTTGTGAACGGGCCCTATGCTCTCATAACAACGGCAGTTTCGGCTGATCTTGGAACACACAAGTCATTGAACGGAAACTCAAGAGCTCTCGCAACCGTTACAGCAATCATTGATGGAACAGGCTCCATAGGGGCTGCAATAGGACCTTTGTTAACAGGTTATGTTTCAGCTAAGAGCTGGAGTGCTGTTTTCTCGATGTTGATGGCAGCAGCTCTAATTGCAGGGCTGTTTTTGACTAGGCTTGTAGTGGCAGAGGTGACTGCAAAGATTGAAGAGTCAAGGTCTAATAGAGGAGTACAAGAACCTTCTCATCTAGTTTAA 1551 0.4462 MGSEHLSGRSCRKPIGIKIIEDLKGSRISFKTHQAIVLIVTFLAYASYHATRKTTSIVKSALDPKSPDLGMNFVPLRLTNFMEANGPMKFSGAFGGGWAPFNGSDGTSLLGQLDVAFLSVYAFGMYFSGHLGDRCNLRIFLTVGMLGTGVFTSLFGVGYWGNIHNFYYFLVVQMIAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGVWNAHTSVGNIAGSLIASAMLSYGWGWSFVLPGLLSAFIGLVIFLILPVTPESVGVDREEDEYIFPNKSGDEEVEEPLLAPPVVDKAVGFIEAWKIPGVAPFAFCLFFSKLVAYTFLYWLPFYVSHTAIDGQYLSSEAAGTLSTLFDVGGVLGGILAGHISDRLGARAITAASFMYCAIPALYFYRSYGHVSLILNAALMFITGLFVNGPYALITTAVSADLGTHKSLNGNSRALATVTAIIDGTGSIGAAIGPLLTGYVSAKSWSAVFSMLMAAALIAGLFLTRLVVAEVTAKIEESRSNRGVQEPSHLV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0054 516 Gene3D MFS general substrate transporter like domains 298 506 IPR036259 -
Lal1g0054 516 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 5 509 - -
Lal1g0054 516 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 5 509 - -
Lal1g0054 516 Pfam Major Facilitator Superfamily 108 427 IPR011701 GO:0022857|GO:0055085
Lal1g0054 516 PIRSF Hexose_phosphate_transp 15 509 IPR000849 GO:0016021|GO:0022857|GO:0055085
Lal1g0054 516 SUPERFAMILY MFS general substrate transporter 106 492 IPR036259 -
Lal1g0054 516 Gene3D MFS general substrate transporter like domains 27 266 IPR036259 -
Lal1g0054 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 497 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0054 Lal-Chr1 408381 411398 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0054 12 516 Organic Solute Cotransporters AT3G47420 72.266 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0054 K13783 - gmx:100799211 838.95