Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0053 ATGGACGCTCAGAGAGCTCTTCTGGATGAACTCATGGGTGCAGCTCGGAACTTGACGGATGAAGAGAGAAAGGGGTACAAGGAAGTGAATTGGGATGATAAGGAAGTGTGTGGTTCCTACATGGTTCGCTTTTGCCCTCACGATCTATTCGTCAACACGCGCAGTGATCTAGGACCTTGCCCAAGAATACATGACCAGAAGTTGAAAGAAAGCTTTGAGAAATCCCCAAGACATGATGCATTTGTCCCCAAATTTGAAGCTGAACTTGCTCAATTTTGTGAGAAATTGGTGATGGACTTGGATAGAAGAGTAAAACGTGGGCGAGAACGTCTTGCTCAAGAGGTCGAGCCTGCACCACCCCCTCCGCTAACAGCTGAAAAGTCTGAACAGCTATCTGTGCTGGAGGAGAAAATAAAGAACCTTCTGGAACAAGTTGAATCTCTGGGTGAAGCGGGGAAGGTTGATGAAGCTGAAGCACTTATGAGAAAGGTGGAGACGCTTAATGTTGAGAAGGCAGCCTTAACACAACCTCAAAATGAAAAGTTGCTGATGCTTGCTCAGGAGAAGAAGATGGCACTCTGTGAGATATGTGGTTCTTTTCTTGTGGCGAATGATGCTGCAGAAAGGACTCAGTCTCATATAACAGGGAAGCAGCATGTTGGTTATGGCATGGTTCGTGACTTCATAAAGGAGTACAAGGATGCTAAAGAGAAGGCTACTGAAGAAGAAAGATTAGTTCGTGAAAGAGAGGCAGAAAATCGAAGGAAACAGAAGGAGAAAGAGTCTGAGAGAAGACGGCGAAGTGATTCAAGTGACAGGGAGAGGCAACGTGACAGAGATAGGGAACGAGATAGGTACAGAGACAGACACTCAGACCGTGAAAGGTCTCGTGATCGAGATGGGGGGAGAGGAATGGATTCTAGGTTGAGGAATGGAAGAAATGGAGGCAGAGACAGTTTATATAAACCAGCACAGGGTTTAAAATGCGGCTTATTCTCACATTCATTTGACATTGAACTGCGTTTGGAAGGTACCAGTTTAGAAGATATGGGTAAACTTTCTGAATCTGTTATTGATTTTCTCCCAAATCCATGA 1095 0.4502 MDAQRALLDELMGAARNLTDEERKGYKEVNWDDKEVCGSYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVKRGRERLAQEVEPAPPPPLTAEKSEQLSVLEEKIKNLLEQVESLGEAGKVDEAEALMRKVETLNVEKAALTQPQNEKLLMLAQEKKMALCEICGSFLVANDAAERTQSHITGKQHVGYGMVRDFIKEYKDAKEKATEEERLVREREAENRRKQKEKESERRRRSDSSDRERQRDRDRERDRYRDRHSDRERSRDRDGGRGMDSRLRNGRNGGRDSLYKPAQGLKCGLFSHSFDIELRLEGTSLEDMGKLSESVIDFLPNP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0053 364 Pfam LUC7 N_terminus 2 248 IPR004882 GO:0003729|GO:0005685|GO:0006376
Lal1g0053 364 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 308 IPR004882 GO:0003729|GO:0005685|GO:0006376
Lal1g0053 364 Coils Coil 1 21 - -
Lal1g0053 364 MobiDBLite consensus disorder prediction 239 315 - -
Lal1g0053 364 Coils Coil 225 266 - -
Lal1g0053 364 Coils Coil 124 151 - -
Lal1g0053 364 PANTHER ARGININE-ASPARTATE-RICH RNA BINDING PROTEIN-LIKE 1 308 - -
Lal1g0053 364 MobiDBLite consensus disorder prediction 239 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0053 Lal-Chr1 397159 404207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0053 - - gmx:100792348 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0053 1 397159 404207 Lal2g0028 2 178220 182872 LSH