Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0048 ATGCAGGCACAATTTATGAAAAATGATCCACAGTACCTGAGTTGCAAACATAAAGGGTGCAGTGGTTCACTAAAGTTTCATGTTGTAAACATTAGAAGTGAGATTGAGTTTGCATTCTTCACTGGTGGATATCTGAGCCCCTGCTTGGTAGCAAGGTCCATACCTATAAAGTTTGAAAATCCTAAGATGCCACTTTATGGACATCTCTCAAGCACAGATTCAACTGGAACATCAATGAGATTGACATGGGTTAGTGGAGACAATAAACCTCAGGAAATCCAATATGGAGATGGGAAAAAAGTTACTTCAGGAGTCACTACATTTTCACAAAGGGATATGTGCAGTACTGCTGATGTTCCAAGTCCTGCCAAGGATTTTGGATGGCATGACCCAGGATTCATCCATTCAGCAGTTATGACAGGACTTAAACCTTCAAGCACCTTCTCCTACAAATATGGAAGTGACTCAGTTGGTTGGAGTGAACAAATCCAGTTTTCAACTCCACCTGCTGGAGGAGCATCAGAAGATCTAAGATTCATTGCATTTGGCGATATGGGCAAGACTCCTCTTGATGATTCAAATGAACACTACATTCAGCCAGGAGCTCATTCGGTTATTACAGCTATAGCCGATGATGTAAAATCGAACAACATAAAATCAATCTTTCACATTGGAGACATAAGTTATGCAACAGGTTTTCTAGCAGAATGGGATTATTTCCTTCATCTAATCAGCCCAGTAGCTTCCAAAATTTCTTACATGACAGCAATAGGGAACCATGAAAGGGATTATATATCTTCCGGTTCAGTATATGGTAAAGCTGACTCTGGTGGTGAATGTGGAGTACCTTATGAAACATACTTCCCAATGCCAGTTCCACAAAATGATAAGCCTTGGTACTCTATTGAACAAGCAAGTGTTCATTTCACAATAATATCTACTGAGCATGATTGGTCACCAAGTTCTGAGCAGTATCAATGGATACAAAAGGACTTGGCATCGGTTAATCGAAAAAATACTCCTTGGCTAGTCTTCATGGGACATAGACAGATGTACCATAGTGGTGGATTAGCTAATGCAGATCTAAAATTTATTAATGCCATCGAGCCGGTGCTATTACATAATAAGGTTGATTTGGTTTTATTCGGCCATGTGCATAACTATGAGAGGACTTGTTCTGTTTATCAAAATGCATGTTTTGCCTTGCCTCAAAAAGATGCAAAAGGAGTTGACACATATAATCACAGAAATTACACTGCCCCTGTGCACGCTATCATTGGCATGGCTGGCTTCACCTTAGACAAATTCCCAAATAAAGTGAAGACCTGGAGCCTGAAAAGGATTTCCAAATATGGATACTTAAGAGGACATGCTACAAGGACAGAATTAAAGTTGGAGTTTGTAAACTCAGACACAAGAAAAGTTGACGATGCTTTCCGCATTACAAAGTGA 1452 0.3981 MQAQFMKNDPQYLSCKHKGCSGSLKFHVVNIRSEIEFAFFTGGYLSPCLVARSIPIKFENPKMPLYGHLSSTDSTGTSMRLTWVSGDNKPQEIQYGDGKKVTSGVTTFSQRDMCSTADVPSPAKDFGWHDPGFIHSAVMTGLKPSSTFSYKYGSDSVGWSEQIQFSTPPAGGASEDLRFIAFGDMGKTPLDDSNEHYIQPGAHSVITAIADDVKSNNIKSIFHIGDISYATGFLAEWDYFLHLISPVASKISYMTAIGNHERDYISSGSVYGKADSGGECGVPYETYFPMPVPQNDKPWYSIEQASVHFTIISTEHDWSPSSEQYQWIQKDLASVNRKNTPWLVFMGHRQMYHSGGLANADLKFINAIEPVLLHNKVDLVLFGHVHNYERTCSVYQNACFALPQKDAKGVDTYNHRNYTAPVHAIIGMAGFTLDKFPNKVKTWSLKRISKYGYLRGHATRTELKLEFVNSDTRKVDDAFRITK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0048 483 SUPERFAMILY Metallo-dependent phosphatases 177 479 IPR029052 -
Lal1g0048 483 Pfam Purple acid Phosphatase, N-terminal domain 68 167 IPR015914 GO:0003993|GO:0046872
Lal1g0048 483 Pfam Iron/zinc purple acid phosphatase-like protein C 420 477 IPR025733 -
Lal1g0048 483 Gene3D - 172 483 IPR029052 -
Lal1g0048 483 PANTHER PURPLE ACID PHOSPHATASE 2 483 - -
Lal1g0048 483 PANTHER PURPLE ACID PHOSPHATASE-RELATED 2 483 - -
Lal1g0048 483 SUPERFAMILY Purple acid phosphatase, N-terminal domain 48 169 IPR008963 GO:0003993|GO:0046872
Lal1g0048 483 CDD MPP_PAPs 175 483 IPR041792 -
Lal1g0048 483 Pfam Fn3-like domain from Purple Acid Phosphatase 2 60 IPR040974 -
Lal1g0048 483 Gene3D - 64 171 - -
Lal1g0048 483 Pfam Calcineurin-like phosphoesterase 177 388 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0048 Lal-Chr1 369720 372455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0048 4 481 Miscellaneous Gene Families AT2G03450 34.317 3.21e-68 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0048 K22390 - gmx:100775839 781.941