Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0043 ATGGGTGTCACCGGAGAACCCGACCTAGAATCCTCTCTCCTCCACACTCCTTCAATCCCAGAAGACAAACACCACTTTGCTTACATAATCTACTTCATCATAGGCTTAGGTTACCTTCTCCCATGGAATGTTTTCATCACCGCCGTCGATTACTTCTCCTACCTCTACCCCGACGTCGCCGTTGACCGGATATTCGCCGCCGTCTACATGCTCCTTGGCCTCGTCGGAATATTACTGATCATTTTCTATAGTCACAAATCTGATGCCTTTGTTCGGATCAACGTTGGTTTGGGGCTCTTTGTTGTGTCCTTGGTTGTGGTTCCGGTTCTGGATGCGTTTTATGTGATGGGTCGGGTTGGGTTGTATGGTGGGTTTTATGTAACGGCGTTGGCGGTTGGGCTTGCCGCCGTGGCGGATGCGTTGGTGCAGGGCTCCATTGTTGGGTCTGCGGGTCTGTTGCCGGAGAGGTATATGCAAGCTGTTATTGCCGGCACTGCTGGTTCCGGGTTATTGTATATTGAGGAACAAGTGTATCTTGATCAATGGTGGATTCTGGACACAGAAACAGATGGTGCAAGTTACATTAAGGAGCCTCCAACCATTGGGGAATGGAGGAGAGTCTCTGTTATAGGGCATGTGAAGAGTGAACAACCACAAGGTTCTAGTTTCTTGTCACCCAAGTATGAAGTAAAGTATATCAATATATTGGTTTCAGGGATTCTTGTTTCTGTCCTGAGGATATTCACAAAAGCTGTTTACTCACAAGATGCCTCTGGCCTGAGGAAGAGTGCAAATCTCTACTTTGCTGTATCAATTGTAATTGAGTTTATATGCATAATTTTATACAACATAGTGCACAGACTTCCTGTTATCAAGTACTACAATGAGCTCAAGATTCAGGCAATCACTAAGGGTGAAGACACTGGACCTCTGACAGGATCTGTATGGAGGTCGAGTGTATGGGATACTGTGGGAGTTATCAAGTGGTACGGGTTGGGTATTGTGCTCATATATGCTGTGACTCTTGCAATATTTCCCGGTTACATTACTGAGGATGTGCACTCTCAACTCTTCAAGGATTGGTATCCAGTTCTCCTCATTGCGGCTTATAATGTGGGTGATCTTGTTGGCAAGTGTCTCACTGCAGTATACCTCCTGGAGAATGCAAAGGTTGCAATAGGTAGTTGCATAGCAAGATTGGCTTTTTTCCCTCTCTTCTTGGGGTGCTTACATGGCCCCAACTTCTTCCGGACAGAGATTCCTGTGACAGTACTGACTTGCTTGTTAGGGATTACTAGTGGCTACCTAACTAGTGTGTTGATGATTTTAGCTCCTAAAATTGTGAAGTTGCAGCATGCAGAGATTGCAGGAATTGTTAGTGTGTTATTCTTAGCTTTTGGTCTGGCTGCTGGGTCAGTTATAGCTTGGTTCTGGGTGATCTGA 1443 0.4574 MGVTGEPDLESSLLHTPSIPEDKHHFAYIIYFIIGLGYLLPWNVFITAVDYFSYLYPDVAVDRIFAAVYMLLGLVGILLIIFYSHKSDAFVRINVGLGLFVVSLVVVPVLDAFYVMGRVGLYGGFYVTALAVGLAAVADALVQGSIVGSAGLLPERYMQAVIAGTAGSGLLYIEEQVYLDQWWILDTETDGASYIKEPPTIGEWRRVSVIGHVKSEQPQGSSFLSPKYEVKYINILVSGILVSVLRIFTKAVYSQDASGLRKSANLYFAVSIVIEFICIILYNIVHRLPVIKYYNELKIQAITKGEDTGPLTGSVWRSSVWDTVGVIKWYGLGIVLIYAVTLAIFPGYITEDVHSQLFKDWYPVLLIAAYNVGDLVGKCLTAVYLLENAKVAIGSCIARLAFFPLFLGCLHGPNFFRTEIPVTVLTCLLGITSGYLTSVLMILAPKIVKLQHAEIAGIVSVLFLAFGLAAGSVIAWFWVI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0043 480 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 8 237 480 - -
Lal1g0043 480 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 8 18 171 - -
Lal1g0043 480 PIRSF ENT 4 173 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal1g0043 480 PIRSF ENT 235 480 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal1g0043 480 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 237 480 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal1g0043 480 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 18 171 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal1g0043 480 Pfam Nucleoside transporter 237 479 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal1g0043 480 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 135 157 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal1g0043 480 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 456 480 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0043 Lal-Chr1 326103 330211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0043 238 480 Organic Solute Cotransporters AT1G70330 68.571 6.45e-118 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0043 K15014 - gmx:100802339 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0043 1 326103 330211 Lal2g0019 2 125746 129756 LSH